RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 SFRP2Q96HF1 295 aa10.16□□□□□ -0.78
SCN4A-203ENST00000584310 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
SCN4A-203ENST00000584310 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
SCN4A-203ENST00000584310 CCL20P78556 96 aa10.15□□□□□ -0.78
SCN4A-203ENST00000584310 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.78
SCN4A-203ENST00000584310 CENPWQ5EE01 88 aa10.15□□□□□ -0.78
SCN4A-203ENST00000584310 TOR2AQ5JU69 321 aa10.15□□□□□ -0.78
SCN4A-203ENST00000584310 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.78
SCN4A-203ENST00000584310 MLST8Q9BVC4 326 aa10.15□□□□□ -0.78
SCN4A-203ENST00000584310 SCRT2Q9NQ03 307 aa10.15□□□□□ -0.78
SCN4A-203ENST00000584310 A0A087WWL8 130 aa10.14□□□□□ -0.79
SCN4A-203ENST00000584310 ZNF56Q15929 161 aa10.14□□□□□ -0.79
SCN4A-203ENST00000584310 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
SCN4A-203ENST00000584310 F5H697 171 aa10.13□□□□□ -0.79
SCN4A-203ENST00000584310 P01737 135 aa10.13□□□□□ -0.79
SCN4A-203ENST00000584310 OR5AL1P0C617 328 aa10.13□□□□□ -0.79
SCN4A-203ENST00000584310 SPATA12Q7Z6I5 190 aa10.13□□□□□ -0.79
SCN4A-203ENST00000584310 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
SCN4A-203ENST00000584310 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
SCN4A-203ENST00000584310 RAB4BP61018 213 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 OR2D3Q8NGH3 330 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 SAMD10Q9BYL1 202 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 JPT2Q9H910 190 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
SCN4A-203ENST00000584310 CACNG7P62955 275 aa10.11□□□□□ -0.79
SCN4A-203ENST00000584310 RPL19P84098 196 aaKnown RBP10.11□□□□□ -0.79
SCN4A-203ENST00000584310 ZNF575Q86XF7 245 aa10.11□□□□□ -0.79
SCN4A-203ENST00000584310 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
SCN4A-203ENST00000584310 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
SCN4A-203ENST00000584310 DNAH6Q9C0G6 4158 aa10.11□□□□□ -0.79
SCN4A-203ENST00000584310 TRBV7-3A0A075B6L6 115 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 F2Z2F3 143 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 H7C1H1 209 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 SNAI2O43623 268 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 IGHV3-30P01768 117 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 IGHV3-33P01772 117 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 IGHV3-30-3P0DP02 117 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 IGHV3-30-5P0DP03 117 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 PKIAP61925 76 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 ELOBQ15370 118 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 CDPF1Q6NVV7 123 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 ALKAL2Q6UX46 152 aa10.1□□□□□ -0.79
SCN4A-203ENST00000584310 A0A087WX48 190 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 TRAV8-3A0A0A6YYJ7 113 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 SSTP61278 116 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 LAGE3Q14657 143 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 TMEM97Q5BJF2 176 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 UFSP1Q6NVU6 142 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 C14orf178Q8N769 122 aaPredicted RBP10.09□□□□□ -0.79
SCN4A-203ENST00000584310 OR10AG1Q8NH19 301 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 RMI2Q96E14 147 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
SCN4A-203ENST00000584310 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
SCN4A-203ENST00000584310 RAB19A4D1S5 217 aa10.08□□□□□ -0.8
SCN4A-203ENST00000584310 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
SCN4A-203ENST00000584310 TRGC1P0CF51 173 aa10.08□□□□□ -0.8
SCN4A-203ENST00000584310 Q6ZSN1 163 aa10.08□□□□□ -0.8
SCN4A-203ENST00000584310 Q9HAA7 133 aa10.08□□□□□ -0.8
SCN4A-203ENST00000584310 FRAS1Q86XX4 4008 aa10.07□□□□□ -0.8
SCN4A-203ENST00000584310 RBFOX3A6NFN3 312 aa10.07□□□□□ -0.8
SCN4A-203ENST00000584310 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
SCN4A-203ENST00000584310 SMIM15Q7Z3B0 74 aa10.07□□□□□ -0.8
SCN4A-203ENST00000584310 EIF5A2Q9GZV4 153 aaKnown RBP10.07□□□□□ -0.8
SCN4A-203ENST00000584310 MUC21A0A0G2JKD1 596 aa10.06□□□□□ -0.8
SCN4A-203ENST00000584310 MUC21A0A140T8X8 626 aa10.06□□□□□ -0.8
SCN4A-203ENST00000584310 CEBPGP53567 150 aa10.06□□□□□ -0.8
SCN4A-203ENST00000584310 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
SCN4A-203ENST00000584310 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
SCN4A-203ENST00000584310 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
SCN4A-203ENST00000584310 DNAH10Q8IVF4 4471 aa10.06□□□□□ -0.8
SCN4A-203ENST00000584310 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
SCN4A-203ENST00000584310 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
SCN4A-203ENST00000584310 MGPP08493 103 aa10.05□□□□□ -0.8
SCN4A-203ENST00000584310 LINC00694P0DN24 101 aa10.05□□□□□ -0.8
SCN4A-203ENST00000584310 DAZ4Q86SG3 579 aaKnown RBP10.05□□□□□ -0.8
SCN4A-203ENST00000584310 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
SCN4A-203ENST00000584310 DAZ3Q9NR90 486 aaKnown RBP10.05□□□□□ -0.8
SCN4A-203ENST00000584310 A0A087WTM6 91 aa10.04□□□□□ -0.8
SCN4A-203ENST00000584310 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
SCN4A-203ENST00000584310 OR10G8Q8NGN5 311 aa10.04□□□□□ -0.8
SCN4A-203ENST00000584310 RPP21Q9H633 154 aaKnown RBP10.04□□□□□ -0.8
SCN4A-203ENST00000584310 UBE2D3P61077 147 aa10.03□□□□□ -0.8
SCN4A-203ENST00000584310 UBE2D2P62837 147 aa10.03□□□□□ -0.8
SCN4A-203ENST00000584310 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
SCN4A-203ENST00000584310 IGLV2-8P01709 118 aa10.02□□□□□ -0.81
SCN4A-203ENST00000584310 CRPP02741 224 aa10.02□□□□□ -0.81
SCN4A-203ENST00000584310 GZMBP10144 247 aa10.02□□□□□ -0.81
SCN4A-203ENST00000584310 Q0VG73 95 aa10.02□□□□□ -0.81
SCN4A-203ENST00000584310 WDR73Q6P4I2 378 aa10.02□□□□□ -0.81
SCN4A-203ENST00000584310 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
SCN4A-203ENST00000584310 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
SCN4A-203ENST00000584310 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
SCN4A-203ENST00000584310 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
SCN4A-203ENST00000584310 TWIST1Q15672 202 aa10.01□□□□□ -0.81
SCN4A-203ENST00000584310 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
SCN4A-203ENST00000584310 NIT1Q86X76 327 aa10.01□□□□□ -0.81
SCN4A-203ENST00000584310 NUDT10Q8NFP7 164 aa10.01□□□□□ -0.81
SCN4A-203ENST00000584310 NUDT11Q96G61 164 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms