RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 LINC00694P0DN24 101 aa14.44□□□□□ -0.1
PPP4R1-228ENST00000584074 FAM74A4Q5TZK3 123 aa14.44□□□□□ -0.1
PPP4R1-228ENST00000584074 SFRP2Q96HF1 295 aa14.44□□□□□ -0.1
PPP4R1-228ENST00000584074 GNG13Q9P2W3 67 aa14.44□□□□□ -0.1
PPP4R1-228ENST00000584074 RHODO00212 210 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 IGHV3-30P01768 117 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 IGHV3-33P01772 117 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 IGHV3-30-3P0DP02 117 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 IGHV3-30-5P0DP03 117 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 RPL19P84098 196 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 TCTE3Q8IZS6 198 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 PGPEP1Q9NXJ5 209 aa14.43□□□□□ -0.1
PPP4R1-228ENST00000584074 IBA57-AS1B1ANH7 110 aa14.42□□□□□ -0.1
PPP4R1-228ENST00000584074 ZFP82Q8N141 532 aa14.42□□□□□ -0.1
PPP4R1-228ENST00000584074 TRAV1-1A0A0B4J248 108 aa14.41□□□□□ -0.1
PPP4R1-228ENST00000584074 RPL35P42766 123 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-228ENST00000584074 MAPKAPK5-AS1Q8N8E1 139 aa14.41□□□□□ -0.1
PPP4R1-228ENST00000584074 MANBALQ9NQG1 85 aa14.41□□□□□ -0.1
PPP4R1-228ENST00000584074 BOLA1Q9Y3E2 137 aa14.41□□□□□ -0.1
PPP4R1-228ENST00000584074 RAB5CP51148 216 aa14.4□□□□□ -0.1
PPP4R1-228ENST00000584074 EIF5AL1Q6IS14 154 aaKnown RBP14.4□□□□□ -0.1
PPP4R1-228ENST00000584074 PRR27Q6MZM9 219 aa14.4□□□□□ -0.1
PPP4R1-228ENST00000584074 Q8N3U1 123 aa14.4□□□□□ -0.1
PPP4R1-228ENST00000584074 DERL1Q9BUN8 251 aa14.4□□□□□ -0.1
PPP4R1-228ENST00000584074 Q9HAA7 133 aa14.4□□□□□ -0.1
PPP4R1-228ENST00000584074 SULT1A2P50226 295 aa14.38□□□□□ -0.11
PPP4R1-228ENST00000584074 OR10AG1Q8NH19 301 aa14.38□□□□□ -0.11
PPP4R1-228ENST00000584074 C11orf52Q96A22 123 aa14.38□□□□□ -0.11
PPP4R1-228ENST00000584074 PSCAO43653 123 aa14.37□□□□□ -0.11
PPP4R1-228ENST00000584074 C1QBP02746 253 aa14.37□□□□□ -0.11
PPP4R1-228ENST00000584074 CDPF1Q6NVV7 123 aa14.37□□□□□ -0.11
PPP4R1-228ENST00000584074 Q6ZNX1 250 aa14.37□□□□□ -0.11
PPP4R1-228ENST00000584074 MUC21A0A0G2JKD1 596 aa14.36□□□□□ -0.11
PPP4R1-228ENST00000584074 MUC21A0A140T8X8 626 aa14.36□□□□□ -0.11
PPP4R1-228ENST00000584074 CXCL1P09341 107 aa14.36□□□□□ -0.11
PPP4R1-228ENST00000584074 A0A087WWC5 75 aa14.35□□□□□ -0.11
PPP4R1-228ENST00000584074 TEX46H3BTG2 121 aa14.35□□□□□ -0.11
PPP4R1-228ENST00000584074 SLC51BQ86UW2 128 aa14.35□□□□□ -0.11
PPP4R1-228ENST00000584074 SSBP4Q9BWG4 385 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-228ENST00000584074 LRCOL1A6NCL2 159 aa14.34□□□□□ -0.11
PPP4R1-228ENST00000584074 SNAI2O43623 268 aa14.34□□□□□ -0.11
PPP4R1-228ENST00000584074 CENPWQ5EE01 88 aa14.34□□□□□ -0.11
PPP4R1-228ENST00000584074 SSTP61278 116 aa14.33□□□□□ -0.12
PPP4R1-228ENST00000584074 LAGE3Q14657 143 aa14.33□□□□□ -0.12
PPP4R1-228ENST00000584074 DAZ4Q86SG3 579 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-228ENST00000584074 DAZ3Q9NR90 486 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-228ENST00000584074 TRBV10-1A0A0K0K1A3 114 aa14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 RAB19A4D1S5 217 aa14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 IGLV2-8P01709 118 aa14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 OR5AL1P0C617 328 aa14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 KRTAP10-1P60331 282 aa14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 MEF2BQ02080 365 aaPredicted RBP14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 Q8N1X5 172 aa14.32□□□□□ -0.12
PPP4R1-228ENST00000584074 RAB4BP61018 213 aa14.31□□□□□ -0.12
PPP4R1-228ENST00000584074 RPL36AP83881 106 aaKnown RBP14.31□□□□□ -0.12
PPP4R1-228ENST00000584074 SPANXN1Q5VSR9 72 aa14.31□□□□□ -0.12
PPP4R1-228ENST00000584074 RPL36ALQ969Q0 106 aaKnown RBP14.31□□□□□ -0.12
PPP4R1-228ENST00000584074 hCG_2014768A0A024R1R8 64 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 TRBV7-3A0A075B6L6 115 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 PDE6DO43924 150 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 GZMBP10144 247 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 GNG4P50150 75 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 UBE2D3P61077 147 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 UBE2D2P62837 147 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 ZNF56Q15929 161 aa14.3□□□□□ -0.12
PPP4R1-228ENST00000584074 IFNA1P01562 189 aa14.29□□□□□ -0.12
PPP4R1-228ENST00000584074 BCL2P10415 239 aa14.29□□□□□ -0.12
PPP4R1-228ENST00000584074 AKAP14Q86UN6 197 aa14.29□□□□□ -0.12
PPP4R1-228ENST00000584074 C9orf62Q8N4C0 152 aa14.29□□□□□ -0.12
PPP4R1-228ENST00000584074 NIT1Q86X76 327 aa14.28□□□□□ -0.12
PPP4R1-228ENST00000584074 OR2D3Q8NGH3 330 aa14.28□□□□□ -0.12
PPP4R1-228ENST00000584074 OR10G8Q8NGN5 311 aa14.28□□□□□ -0.12
PPP4R1-228ENST00000584074 DAZAP1Q96EP5 407 aaKnown RBP14.28□□□□□ -0.12
PPP4R1-228ENST00000584074 TM2D2Q9BX73 214 aa14.28□□□□□ -0.12
PPP4R1-228ENST00000584074 MED9Q9NWA0 146 aa14.28□□□□□ -0.12
PPP4R1-228ENST00000584074 TRBV20OR9-2A0A075B6H5 130 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 C19orf71A6NCJ1 209 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 RBFOX3A6NFN3 312 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 GCSHP23434 173 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 Q8N814 137 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 NEXN-AS1Q8NBZ9 246 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 TPPP3Q9BW30 176 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 VAX2Q9UIW0 290 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 URGCP-MRPS24S4R325 110 aa14.27□□□□□ -0.13
PPP4R1-228ENST00000584074 IGLV5-52A0A0A0MRZ9 124 aa14.26□□□□□ -0.13
PPP4R1-228ENST00000584074 F5H697 171 aa14.26□□□□□ -0.13
PPP4R1-228ENST00000584074 IGLC6P0CF74 106 aa14.26□□□□□ -0.13
PPP4R1-228ENST00000584074 XGP55808 180 aa14.26□□□□□ -0.13
PPP4R1-228ENST00000584074 SMIM12Q96EX1 92 aa14.26□□□□□ -0.13
PPP4R1-228ENST00000584074 KIF25-AS1Q9Y6Z4 181 aa14.26□□□□□ -0.13
PPP4R1-228ENST00000584074 TOR2AQ5JU69 321 aa14.25□□□□□ -0.13
PPP4R1-228ENST00000584074 DNAJC30Q96LL9 226 aa14.25□□□□□ -0.13
PPP4R1-228ENST00000584074 SMIM17P0DL12 118 aa14.24□□□□□ -0.13
PPP4R1-228ENST00000584074 RPS20P60866 119 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-228ENST00000584074 WFDC2Q14508 124 aa14.24□□□□□ -0.13
PPP4R1-228ENST00000584074 FER1L6-AS1Q8NA97 138 aa14.24□□□□□ -0.13
PPP4R1-228ENST00000584074 NTN5Q8WTR8 489 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-228ENST00000584074 AP1S3Q96PC3 154 aa14.24□□□□□ -0.13
PPP4R1-228ENST00000584074 KLK12Q9UKR0 248 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms