RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 HTN1P15515 57 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 FOXA3P55318 350 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-206ENST00000583741 PGLYRP4Q96LB8 373 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 LINC00467Q9BRT7 94 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 TP53TG3Q9ULZ0 132 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 TRGV11A0A075B6L2 103 aa14.28□□□□□ -0.12
SRSF1-206ENST00000583741 TRAV9-1A0A075B6T8 112 aa14.28□□□□□ -0.12
SRSF1-206ENST00000583741 PLAC8L1A1L4L8 177 aa14.28□□□□□ -0.12
SRSF1-206ENST00000583741 NUDT3O95989 172 aa14.28□□□□□ -0.12
SRSF1-206ENST00000583741 S100A4P26447 101 aaKnown RBP14.28□□□□□ -0.12
SRSF1-206ENST00000583741 DNLZQ5SXM8 178 aa14.28□□□□□ -0.12
SRSF1-206ENST00000583741 YPEL4Q96NS1 127 aa14.28□□□□□ -0.12
SRSF1-206ENST00000583741 H3BVH4 76 aa14.27□□□□□ -0.12
SRSF1-206ENST00000583741 LYZL1Q6UWQ5 148 aa14.27□□□□□ -0.12
SRSF1-206ENST00000583741 Q8N1X5 172 aa14.27□□□□□ -0.12
SRSF1-206ENST00000583741 BTF3L4Q96K17 158 aa14.27□□□□□ -0.12
SRSF1-206ENST00000583741 LINC00588Q9Y4M8 146 aa14.27□□□□□ -0.12
SRSF1-206ENST00000583741 TGIF2-C20orf24A0A0A6YYL0 155 aa14.26□□□□□ -0.13
SRSF1-206ENST00000583741 F5H768 121 aa14.26□□□□□ -0.13
SRSF1-206ENST00000583741 AZU1P20160 251 aa14.26□□□□□ -0.13
SRSF1-206ENST00000583741 CTRLP40313 264 aa14.26□□□□□ -0.13
SRSF1-206ENST00000583741 TRBV24-1A0A075B6N3 115 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 IGHV3-16A0A0C4DH30 117 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 F2Z2F3 143 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 SPINK4O60575 86 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 OR5AL1P0C617 328 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 ARMS2P0C7Q2 107 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 BORCS7Q96B45 105 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 TIMM8BQ9Y5J9 83 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-206ENST00000583741 SNAI2O43623 268 aa14.25□□□□□ -0.13
SRSF1-206ENST00000583741 RNASE3P12724 160 aaKnown RBP14.25□□□□□ -0.13
SRSF1-206ENST00000583741 SSBP4Q9BWG4 385 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-206ENST00000583741 A0A1B0GUT8 65 aa14.24□□□□□ -0.13
SRSF1-206ENST00000583741 CCL18P55774 89 aa14.24□□□□□ -0.13
SRSF1-206ENST00000583741 MRPL54Q6P161 138 aaKnown RBP14.24□□□□□ -0.13
SRSF1-206ENST00000583741 SPATA12Q7Z6I5 190 aa14.24□□□□□ -0.13
SRSF1-206ENST00000583741 MDFICQ9P1T7 246 aa14.24□□□□□ -0.13
SRSF1-206ENST00000583741 COLCA2A8K830 154 aa14.23□□□□□ -0.13
SRSF1-206ENST00000583741 ATP5G1P05496 136 aa14.23□□□□□ -0.13
SRSF1-206ENST00000583741 ZNF415Q09FC8 603 aa14.23□□□□□ -0.13
SRSF1-206ENST00000583741 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-206ENST00000583741 SCRT2Q9NQ03 307 aa14.23□□□□□ -0.13
SRSF1-206ENST00000583741 MUC21A0A0G2JKD1 596 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 MUC21A0A140T8X8 626 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 ATP5L2Q7Z4Y8 100 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 OR10AG1Q8NH19 301 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 C9orf85Q96MD7 179 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 CNFNQ9BYD5 112 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 KRTAP1-5Q9BYS1 174 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 PHLDA3Q9Y5J5 127 aa14.22□□□□□ -0.13
SRSF1-206ENST00000583741 SSTP61278 116 aa14.21□□□□□ -0.13
SRSF1-206ENST00000583741 RIGQ13278 110 aa14.21□□□□□ -0.13
SRSF1-206ENST00000583741 TMEM263Q8WUH6 116 aaKnown RBP14.21□□□□□ -0.13
SRSF1-206ENST00000583741 CACNG7P62955 275 aa14.2□□□□□ -0.14
SRSF1-206ENST00000583741 SPANXN1Q5VSR9 72 aa14.2□□□□□ -0.14
SRSF1-206ENST00000583741 C11orf72Q8NBR9 251 aa14.2□□□□□ -0.14
SRSF1-206ENST00000583741 RNASE8Q8TDE3 154 aaKnown RBP14.2□□□□□ -0.14
SRSF1-206ENST00000583741 KRTAP10-2P60368 255 aa14.19□□□□□ -0.14
SRSF1-206ENST00000583741 HBBP68871 147 aa14.19□□□□□ -0.14
SRSF1-206ENST00000583741 WDR73Q6P4I2 378 aa14.19□□□□□ -0.14
SRSF1-206ENST00000583741 ZNF493Q6ZR52 646 aa14.19□□□□□ -0.14
SRSF1-206ENST00000583741 C16orf74Q96GX8 76 aa14.19□□□□□ -0.14
SRSF1-206ENST00000583741 GSN-AS1Q9NRJ2 163 aa14.19□□□□□ -0.14
SRSF1-206ENST00000583741 A0A1B0GXF2 115 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 NTF3P20783 257 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 CAMPP49913 170 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 RASL11AQ6T310 242 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 Q9H8V8 135 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 A0A1B0GW15 77 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 M0R381 172 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 RAB5AP20339 215 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 TWIST1Q15672 202 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 ZFP82Q8N141 532 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 SPXQ9BT56 116 aa14.18□□□□□ -0.14
SRSF1-206ENST00000583741 SNURFLB1AK76 121 aa14.17□□□□□ -0.14
SRSF1-206ENST00000583741 S100A8P05109 93 aa14.17□□□□□ -0.14
SRSF1-206ENST00000583741 NXPH4O95158 308 aa14.16□□□□□ -0.14
SRSF1-206ENST00000583741 COX19Q49B96 90 aa14.16□□□□□ -0.14
SRSF1-206ENST00000583741 MSRB1Q9NZV6 116 aa14.16□□□□□ -0.14
SRSF1-206ENST00000583741 FAT1Q14517 4588 aa14.16□□□□□ -0.14
SRSF1-206ENST00000583741 RPS10P46783 165 aaKnown RBP14.15□□□□□ -0.14
SRSF1-206ENST00000583741 RAB4BP61018 213 aa14.15□□□□□ -0.14
SRSF1-206ENST00000583741 SYT8Q8NBV8 401 aa14.15□□□□□ -0.14
SRSF1-206ENST00000583741 NOP10Q9NPE3 64 aaKnown RBP14.15□□□□□ -0.14
SRSF1-206ENST00000583741 DMBT1Q9UGM3 2413 aaPredicted RBP14.14□□□□□ -0.15
SRSF1-206ENST00000583741 M0R2P5 195 aa14.14□□□□□ -0.15
SRSF1-206ENST00000583741 DMRTA1Q5VZB9 504 aa14.14□□□□□ -0.15
SRSF1-206ENST00000583741 GNB1LQ9BYB4 327 aa14.14□□□□□ -0.15
SRSF1-206ENST00000583741 TRAV26-1A0A087WT03 109 aa14.13□□□□□ -0.15
SRSF1-206ENST00000583741 ZNF876PQ49A33 203 aa14.13□□□□□ -0.15
SRSF1-206ENST00000583741 TTC32Q5I0X7 151 aa14.13□□□□□ -0.15
SRSF1-206ENST00000583741 HLA-DQA1P01909 254 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 MT-ND6P03923 174 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 TRGC1P0CF51 173 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 TMEM136Q6ZRR5 245 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 AP1S3Q96PC3 154 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 DAZ2Q13117 558 aaKnown RBP14.12□□□□□ -0.15
SRSF1-206ENST00000583741 SMIM15Q7Z3B0 74 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 GATD1Q8NB37 220 aa14.12□□□□□ -0.15
SRSF1-206ENST00000583741 PTH2Q96A98 100 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms