RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 DOCK11Q5JSL3 2073 aa0.03□□□□□ -2.4
SMARCE1-219ENST00000583294 A0A087WTM6 91 aa0.03□□□□□ -2.4
SMARCE1-219ENST00000583294 GVQW2A0A096LPI5 108 aaPredicted RBP0.03□□□□□ -2.4
SMARCE1-219ENST00000583294 CCL3L1P16619 93 aa0.03□□□□□ -2.4
SMARCE1-219ENST00000583294 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
SMARCE1-219ENST00000583294 CDK5RAP2Q96SN8 1893 aa0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 NCS1P62166 190 aa0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 COX6A2Q02221 97 aa0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 C4orf33Q8N1A6 199 aa0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 ANKRD30AQ9BXX3 1397 aa0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 LAMC3Q9Y6N6 1575 aa0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 CCDC179H3BU77 68 aa0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 M0R129 80 aa0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 DR1Q01658 176 aa0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 C20orf197Q8N268 126 aa0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 UBR5O95071 2799 aaPredicted RBP0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 UNC79Q9P2D8 2635 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 CELSR2Q9HCU4 2923 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 TRBV20-1A0A075B6N2 111 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 SCGB1A1P11684 91 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 SSBP1Q04837 148 aaKnown RBP0□□□□□ -2.41
SMARCE1-219ENST00000583294 SPCS2Q15005 226 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 AKAP14Q86UN6 197 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 SMIM11BQ8TCY0 68 aa0□□□□□ -2.41
SMARCE1-219ENST00000583294 CACNA1CQ13936 2221 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 SSPOA2VEC9 5147 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 UNC13BO14795 1591 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 TRAV12-3A0A0B4J271 114 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 NMBP08949 121 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 LINC01545Q5VT33 79 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 MMGT1Q8N4V1 131 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 COX7B2Q8TF08 81 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 PYDC1Q8WXC3 89 aa-0.01□□□□□ -2.41
SMARCE1-219ENST00000583294 TRBV7-1A0A0A6YYK4 115 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 APODP05090 189 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 HIST1H1AQ02539 215 aaPredicted RBP-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 FAM74A4Q5TZK3 123 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 SLC48A1Q6P1K1 146 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 FAM213BQ8TBF2 198 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 TMEM242Q9NWH2 141 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 NDUFA12Q9UI09 145 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 PHIPQ8WWQ0 1821 aa-0.02□□□□□ -2.41
SMARCE1-219ENST00000583294 CELSR1Q9NYQ6 3014 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 FAM236AA0A1B0GUQ0 79 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 FAM236BA0A1B0GV22 79 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 V9GYV3 84 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 SSC5DA1L4H1 1573 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 AKAP11Q9UKA4 1901 aa-0.03□□□□□ -2.41
SMARCE1-219ENST00000583294 MIC13Q5XKP0 118 aa-0.04□□□□□ -2.42
SMARCE1-219ENST00000583294 Q96NJ1 140 aa-0.04□□□□□ -2.42
SMARCE1-219ENST00000583294 SMIM3Q9BZL3 60 aa-0.04□□□□□ -2.42
SMARCE1-219ENST00000583294 IGLC6P0CF74 106 aa-0.05□□□□□ -2.42
SMARCE1-219ENST00000583294 ACYP2P14621 99 aa-0.05□□□□□ -2.42
SMARCE1-219ENST00000583294 CKS1BP61024 79 aa-0.05□□□□□ -2.42
SMARCE1-219ENST00000583294 VSTM2AQ8TAG5 236 aa-0.05□□□□□ -2.42
SMARCE1-219ENST00000583294 NRXN2Q9P2S2 1712 aa-0.06□□□□□ -2.42
SMARCE1-219ENST00000583294 OVOS2A0A0J9YW53 1432 aa-0.06□□□□□ -2.42
SMARCE1-219ENST00000583294 OVOS2Q6IE36 1432 aa-0.06□□□□□ -2.42
SMARCE1-219ENST00000583294 MACF1Q9UPN3 7388 aaKnown RBP-0.07□□□□□ -2.42
SMARCE1-219ENST00000583294 SAR1AQ9NR31 198 aa-0.07□□□□□ -2.42
SMARCE1-219ENST00000583294 MUC22E2RYF6 1773 aaPredicted RBP-0.08□□□□□ -2.42
SMARCE1-219ENST00000583294 MYH6P13533 1939 aa-0.08□□□□□ -2.42
SMARCE1-219ENST00000583294 ARPC5O15511 151 aa-0.08□□□□□ -2.42
SMARCE1-219ENST00000583294 PIRTP0C851 137 aa-0.08□□□□□ -2.42
SMARCE1-219ENST00000583294 ARHGEF10O15013 1369 aa-0.08□□□□□ -2.42
SMARCE1-219ENST00000583294 SPANXN1Q5VSR9 72 aa-0.09□□□□□ -2.42
SMARCE1-219ENST00000583294 GSKIPQ9P0R6 139 aa-0.09□□□□□ -2.42
SMARCE1-219ENST00000583294 PARP14Q460N5 1801 aa-0.09□□□□□ -2.42
SMARCE1-219ENST00000583294 ARFGEF1Q9Y6D6 1849 aa-0.1□□□□□ -2.43
SMARCE1-219ENST00000583294 TRGV1A0A0A0MS02 117 aa-0.1□□□□□ -2.43
SMARCE1-219ENST00000583294 LINC00694P0DN24 101 aa-0.1□□□□□ -2.43
SMARCE1-219ENST00000583294 Q6ZRX8 168 aa-0.1□□□□□ -2.43
SMARCE1-219ENST00000583294 DISP2A7MBM2 1401 aa-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 RPL7L1Q6DKI1 246 aaKnown RBP-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 CTAGE3PQ8IX95 158 aa-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 C10orf82Q8WW14 230 aa-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 LZICQ8WZA0 190 aa-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 BATF3Q9NR55 127 aa-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 U3KQA8 63 aa-0.11□□□□□ -2.43
SMARCE1-219ENST00000583294 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
SMARCE1-219ENST00000583294 TMEM14DPA8MWL7 114 aa-0.12□□□□□ -2.43
SMARCE1-219ENST00000583294 J3QR89 54 aa-0.12□□□□□ -2.43
SMARCE1-219ENST00000583294 M0R2Z0 102 aa-0.12□□□□□ -2.43
SMARCE1-219ENST00000583294 GCHFRP30047 84 aa-0.13□□□□□ -2.43
SMARCE1-219ENST00000583294 PSMG3Q9BT73 122 aaPredicted RBP-0.13□□□□□ -2.43
SMARCE1-219ENST00000583294 RPRMQ9NS64 109 aa-0.13□□□□□ -2.43
SMARCE1-219ENST00000583294 CHD9Q3L8U1 2897 aa-0.14□□□□□ -2.43
SMARCE1-219ENST00000583294 C9orf116Q5BN46 136 aaPredicted RBP-0.14□□□□□ -2.43
SMARCE1-219ENST00000583294 K7ERU9 68 aa-0.15□□□□□ -2.43
SMARCE1-219ENST00000583294 PITX3O75364 302 aa-0.15□□□□□ -2.43
SMARCE1-219ENST00000583294 TSPAN19P0C672 248 aa-0.15□□□□□ -2.43
SMARCE1-219ENST00000583294 EDDM3BP56851 147 aa-0.15□□□□□ -2.43
SMARCE1-219ENST00000583294 UBE2G1P62253 170 aa-0.15□□□□□ -2.43
SMARCE1-219ENST00000583294 Q6ZUT4 128 aa-0.15□□□□□ -2.43
SMARCE1-219ENST00000583294 LAMB1P07942 1786 aa-0.16□□□□□ -2.43
SMARCE1-219ENST00000583294 A6NIN4 97 aa-0.16□□□□□ -2.44
SMARCE1-219ENST00000583294 INSL4Q14641 139 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms