RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 OR2D3Q8NGH3 330 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 KRTAP1-5Q9BYS1 174 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 EIF5A2Q9GZV4 153 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 BIN3Q9NQY0 253 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 A0A1W2PPQ1 181 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 TMEM250H0YL14 139 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 SNAI2O43623 268 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 P01737 135 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 GZMBP10144 247 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 RPS20P60866 119 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 GAGE1Q13065 139 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 GAGE4Q13068 117 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 GAGE5Q13069 117 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 SPANXN1Q5VSR9 72 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 TPPP3Q9BW30 176 aa8.63□□□□□ -1.03
SMARCE1-218ENST00000582955 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
SMARCE1-218ENST00000582955 XKRY2A2RUG3 117 aa8.62□□□□□ -1.03
SMARCE1-218ENST00000582955 CRYGDP07320 174 aa8.62□□□□□ -1.03
SMARCE1-218ENST00000582955 OR5AL1P0C617 328 aa8.62□□□□□ -1.03
SMARCE1-218ENST00000582955 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
SMARCE1-218ENST00000582955 ATP6V0E2Q8NHE4 81 aa8.62□□□□□ -1.03
SMARCE1-218ENST00000582955 FAT2Q9NYQ8 4349 aa8.61□□□□□ -1.03
SMARCE1-218ENST00000582955 FER1L6-AS1Q8NA97 138 aa8.61□□□□□ -1.03
SMARCE1-218ENST00000582955 FAM210AQ96ND0 272 aa8.61□□□□□ -1.03
SMARCE1-218ENST00000582955 SSBP4Q9BWG4 385 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-218ENST00000582955 LY96Q9Y6Y9 160 aa8.61□□□□□ -1.03
SMARCE1-218ENST00000582955 K7EN84 100 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 TIRAPP58753 221 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 ZNF56Q15929 161 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 OR10J3Q5JRS4 329 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 NUDT10Q8NFP7 164 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 OCC1Q8TAD7 63 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 NUDT11Q96G61 164 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 HECTD4Q9Y4D8 3996 aa8.6□□□□□ -1.03
SMARCE1-218ENST00000582955 DNAH17Q9UFH2 4485 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 TRAV9-2A0A087WT02 112 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 SMIM17P0DL12 118 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 EVI2AP22794 236 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 LINC00315P59091 139 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 TNP2Q05952 138 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 RNASE7Q9H1E1 156 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 Q9UF83 564 aa8.59□□□□□ -1.03
SMARCE1-218ENST00000582955 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 LINC00694P0DN24 101 aa8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 RAB4BP61018 213 aa8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 LELP1Q5T871 98 aa8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 SMIM7Q9BQ49 75 aa8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-218ENST00000582955 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 F2Z2F3 143 aa8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 F5H697 171 aa8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 CACNG7P62955 275 aa8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 RPL36AP83881 106 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 LYZL1Q6UWQ5 148 aa8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 RPL36ALQ969Q0 106 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-218ENST00000582955 TRBV10-1A0A0K0K1A3 114 aa8.56□□□□□ -1.04
SMARCE1-218ENST00000582955 ZNF727A8MUV8 499 aa8.56□□□□□ -1.04
SMARCE1-218ENST00000582955 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-218ENST00000582955 NDUFS6O75380 124 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-218ENST00000582955 MGPP08493 103 aa8.56□□□□□ -1.04
SMARCE1-218ENST00000582955 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
SMARCE1-218ENST00000582955 K7EP13 123 aa8.55□□□□□ -1.04
SMARCE1-218ENST00000582955 ERVFC1-1P60608 527 aa8.55□□□□□ -1.04
SMARCE1-218ENST00000582955 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
SMARCE1-218ENST00000582955 TNFRSF18Q9Y5U5 241 aa8.55□□□□□ -1.04
SMARCE1-218ENST00000582955 TRBV7-3A0A075B6L6 115 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 A0A087WWC5 75 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 TRGC1P0CF51 173 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 CTRLP40313 264 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
SMARCE1-218ENST00000582955 NTF3P20783 257 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 UBE2D3P61077 147 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 UBE2D2P62837 147 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 PEA15Q15121 130 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 TWIST1Q15672 202 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 OR10G8Q8NGN5 311 aa8.53□□□□□ -1.04
SMARCE1-218ENST00000582955 A8MWL6 223 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms