RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SPATA12Q7Z6I5 190 aa14.32□□□□□ -0.12
CCDC42-203ENST00000581598 SVBPQ8N300 66 aa14.32□□□□□ -0.12
CCDC42-203ENST00000581598 CLRN3Q8NCR9 226 aa14.32□□□□□ -0.12
CCDC42-203ENST00000581598 LRP1BQ9NZR2 4599 aa14.32□□□□□ -0.12
CCDC42-203ENST00000581598 TRGV4A0A0C4DH28 118 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 M0R036 132 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 LINC00315P59091 139 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 LYPD5Q6UWN5 251 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 Q6ZRN7 208 aaPredicted RBP14.31□□□□□ -0.12
CCDC42-203ENST00000581598 NEGR1Q7Z3B1 354 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 C15orf54Q8N8G6 183 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 OR10G8Q8NGN5 311 aa14.31□□□□□ -0.12
CCDC42-203ENST00000581598 RPP21Q9H633 154 aaKnown RBP14.31□□□□□ -0.12
CCDC42-203ENST00000581598 GATCO43716 136 aaKnown RBP14.3□□□□□ -0.12
CCDC42-203ENST00000581598 ORM1P02763 201 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 CXCL1P09341 107 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 CT83Q5H943 113 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 ZNF479Q96JC4 524 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 KCNS1Q96KK3 526 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 NAGKQ9UJ70 344 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 V9GYV3 84 aa14.3□□□□□ -0.12
CCDC42-203ENST00000581598 PPP1R2P9O14990 202 aa14.29□□□□□ -0.12
CCDC42-203ENST00000581598 SNAPINO95295 136 aa14.29□□□□□ -0.12
CCDC42-203ENST00000581598 MT-ND4LP03901 98 aa14.29□□□□□ -0.12
CCDC42-203ENST00000581598 RPL19P84098 196 aaKnown RBP14.29□□□□□ -0.12
CCDC42-203ENST00000581598 RHEBQ15382 184 aa14.29□□□□□ -0.12
CCDC42-203ENST00000581598 OR2D3Q8NGH3 330 aa14.29□□□□□ -0.12
CCDC42-203ENST00000581598 TRAV4A0A0B4J268 109 aa14.28□□□□□ -0.12
CCDC42-203ENST00000581598 IGHV3-16A0A0C4DH30 117 aa14.28□□□□□ -0.12
CCDC42-203ENST00000581598 TYMSP04818 313 aa14.28□□□□□ -0.12
CCDC42-203ENST00000581598 RPS20P60866 119 aaKnown RBP14.28□□□□□ -0.12
CCDC42-203ENST00000581598 DNLZQ5SXM8 178 aa14.28□□□□□ -0.12
CCDC42-203ENST00000581598 ANAPC16Q96DE5 110 aa14.28□□□□□ -0.12
CCDC42-203ENST00000581598 A0A087WWC5 75 aa14.27□□□□□ -0.13
CCDC42-203ENST00000581598 C7orf77A4D0Y5 90 aa14.27□□□□□ -0.13
CCDC42-203ENST00000581598 K7EQD1 137 aa14.27□□□□□ -0.13
CCDC42-203ENST00000581598 M0R2P5 195 aa14.27□□□□□ -0.13
CCDC42-203ENST00000581598 SRIP30626 198 aa14.27□□□□□ -0.13
CCDC42-203ENST00000581598 K7EP13 123 aa14.26□□□□□ -0.13
CCDC42-203ENST00000581598 GNRH2O43555 120 aa14.26□□□□□ -0.13
CCDC42-203ENST00000581598 S100A1P23297 94 aa14.26□□□□□ -0.13
CCDC42-203ENST00000581598 KRTAP10-2P60368 255 aa14.26□□□□□ -0.13
CCDC42-203ENST00000581598 CTDSP1Q9GZU7 261 aa14.26□□□□□ -0.13
CCDC42-203ENST00000581598 TMSB15BA0A087X1C1 80 aa14.25□□□□□ -0.13
CCDC42-203ENST00000581598 XKRY2A2RUG3 117 aa14.25□□□□□ -0.13
CCDC42-203ENST00000581598 A8MWL6 223 aa14.25□□□□□ -0.13
CCDC42-203ENST00000581598 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
CCDC42-203ENST00000581598 GYPEP15421 78 aa14.24□□□□□ -0.13
CCDC42-203ENST00000581598 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
CCDC42-203ENST00000581598 OR4C5Q8NGB2 326 aa14.24□□□□□ -0.13
CCDC42-203ENST00000581598 TSKUQ8WUA8 353 aa14.24□□□□□ -0.13
CCDC42-203ENST00000581598 TMEM242Q9NWH2 141 aa14.24□□□□□ -0.13
CCDC42-203ENST00000581598 GRIFINA4D1Z8 144 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 FAM231BA6NCW3 169 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 IGLC6P0CF74 106 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 GZMBP10144 247 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 ASIPP42127 132 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 ATRAIDQ6UW56 229 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 GFRA4Q9GZZ7 299 aa14.23□□□□□ -0.13
CCDC42-203ENST00000581598 RNASE3P12724 160 aaKnown RBP14.22□□□□□ -0.13
CCDC42-203ENST00000581598 FOXA3P55318 350 aaPredicted RBP14.22□□□□□ -0.13
CCDC42-203ENST00000581598 SH2D6Q7Z4S9 175 aa14.22□□□□□ -0.13
CCDC42-203ENST00000581598 GTSF1Q8WW33 167 aa14.22□□□□□ -0.13
CCDC42-203ENST00000581598 C9orf85Q96MD7 179 aa14.22□□□□□ -0.13
CCDC42-203ENST00000581598 RPS10P5Q9NQ39 176 aa14.22□□□□□ -0.13
CCDC42-203ENST00000581598 IL36BQ9NZH7 164 aa14.22□□□□□ -0.13
CCDC42-203ENST00000581598 SMIM27A0A1W2PRY6 76 aa14.21□□□□□ -0.13
CCDC42-203ENST00000581598 SNAI2O43623 268 aa14.21□□□□□ -0.13
CCDC42-203ENST00000581598 CIDEAO60543 219 aa14.21□□□□□ -0.13
CCDC42-203ENST00000581598 TIRAPP58753 221 aa14.21□□□□□ -0.13
CCDC42-203ENST00000581598 MAPKAPK5-AS1Q8N8E1 139 aa14.21□□□□□ -0.13
CCDC42-203ENST00000581598 SSBP4Q9BWG4 385 aaPredicted RBP14.21□□□□□ -0.13
CCDC42-203ENST00000581598 SCRT2Q9NQ03 307 aa14.21□□□□□ -0.13
CCDC42-203ENST00000581598 DNAH5Q8TE73 4624 aa14.2□□□□□ -0.14
CCDC42-203ENST00000581598 OR5AL1P0C617 328 aa14.2□□□□□ -0.14
CCDC42-203ENST00000581598 DNAH10OSP0CZ25 163 aa14.2□□□□□ -0.14
CCDC42-203ENST00000581598 GATA1P15976 413 aaPredicted RBP14.2□□□□□ -0.14
CCDC42-203ENST00000581598 FER1L6-AS1Q8NA97 138 aa14.2□□□□□ -0.14
CCDC42-203ENST00000581598 IMMP2LQ96T52 175 aa14.2□□□□□ -0.14
CCDC42-203ENST00000581598 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
CCDC42-203ENST00000581598 APOBP04114 4563 aaKnown RBP14.2□□□□□ -0.14
CCDC42-203ENST00000581598 H3BVH4 76 aa14.19□□□□□ -0.14
CCDC42-203ENST00000581598 EREGO14944 169 aa14.19□□□□□ -0.14
CCDC42-203ENST00000581598 EVI2AP22794 236 aa14.19□□□□□ -0.14
CCDC42-203ENST00000581598 S100A4P26447 101 aaKnown RBP14.19□□□□□ -0.14
CCDC42-203ENST00000581598 CTRLP40313 264 aa14.19□□□□□ -0.14
CCDC42-203ENST00000581598 WFDC10BQ8IUB3 73 aa14.19□□□□□ -0.14
CCDC42-203ENST00000581598 PTH2Q96A98 100 aa14.19□□□□□ -0.14
CCDC42-203ENST00000581598 ARMS2P0C7Q2 107 aa14.18□□□□□ -0.14
CCDC42-203ENST00000581598 CDPF1Q6NVV7 123 aa14.18□□□□□ -0.14
CCDC42-203ENST00000581598 Q8N1X5 172 aa14.18□□□□□ -0.14
CCDC42-203ENST00000581598 TNFRSF18Q9Y5U5 241 aa14.18□□□□□ -0.14
CCDC42-203ENST00000581598 HIGD1CA8MV81 97 aa14.17□□□□□ -0.14
CCDC42-203ENST00000581598 ZNF876PQ49A33 203 aa14.17□□□□□ -0.14
CCDC42-203ENST00000581598 CNFNQ9BYD5 112 aa14.17□□□□□ -0.14
CCDC42-203ENST00000581598 MSRB1Q9NZV6 116 aa14.17□□□□□ -0.14
CCDC42-203ENST00000581598 NAT8BQ9UHF3 227 aa14.17□□□□□ -0.14
CCDC42-203ENST00000581598 F2Z2F3 143 aa14.16□□□□□ -0.14
CCDC42-203ENST00000581598 RS1O15537 224 aa14.16□□□□□ -0.14
CCDC42-203ENST00000581598 LYZL1Q6UWQ5 148 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms