RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 PRR27Q6MZM9 219 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 PCNPQ8WW12 178 aaKnown RBP8.63□□□□□ -1.03
SNORD55-201ENST00000581525 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 LY96Q9Y6Y9 160 aa8.63□□□□□ -1.03
SNORD55-201ENST00000581525 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 K7EN84 100 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 WDR73Q6P4I2 378 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 OR10AG1Q8NH19 301 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
SNORD55-201ENST00000581525 NUDT11Q96G61 164 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
SNORD55-201ENST00000581525 F2Z2F3 143 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
SNORD55-201ENST00000581525 LINC00315P59091 139 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 FAM231DQ6ZW35 169 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 C6orf223Q8N319 242 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 OR2D3Q8NGH3 330 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 Q9UF83 564 aa8.61□□□□□ -1.03
SNORD55-201ENST00000581525 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 M0R381 172 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 P01737 135 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 TOR2AQ5JU69 321 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 CNFNQ9BYD5 112 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
SNORD55-201ENST00000581525 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 SMDT1Q9H4I9 107 aa8.6□□□□□ -1.03
SNORD55-201ENST00000581525 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
SNORD55-201ENST00000581525 RAB4BP61018 213 aa8.59□□□□□ -1.03
SNORD55-201ENST00000581525 C14orf178Q8N769 122 aaPredicted RBP8.59□□□□□ -1.03
SNORD55-201ENST00000581525 FER1L6-AS1Q8NA97 138 aa8.59□□□□□ -1.03
SNORD55-201ENST00000581525 OR10G8Q8NGN5 311 aa8.59□□□□□ -1.03
SNORD55-201ENST00000581525 ATP6V0E2Q8NHE4 81 aa8.59□□□□□ -1.03
SNORD55-201ENST00000581525 A0A087WWL8 130 aa8.58□□□□□ -1.04
SNORD55-201ENST00000581525 GZMBP10144 247 aa8.58□□□□□ -1.04
SNORD55-201ENST00000581525 FOXA3P55318 350 aaPredicted RBP8.58□□□□□ -1.04
SNORD55-201ENST00000581525 CACNG7P62955 275 aa8.58□□□□□ -1.04
SNORD55-201ENST00000581525 LELP1Q5T871 98 aa8.58□□□□□ -1.04
SNORD55-201ENST00000581525 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
SNORD55-201ENST00000581525 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
SNORD55-201ENST00000581525 CTRLP40313 264 aa8.57□□□□□ -1.04
SNORD55-201ENST00000581525 LYZL1Q6UWQ5 148 aa8.57□□□□□ -1.04
SNORD55-201ENST00000581525 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
SNORD55-201ENST00000581525 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
SNORD55-201ENST00000581525 TRAV9-2A0A087WT02 112 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 GAGE12JA6NER3 117 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 GAGE1Q13065 139 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 GAGE4Q13068 117 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 GAGE5Q13069 117 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 GAGE13Q4V321 117 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 FAM74A3Q4VXF1 159 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 CT83Q5H943 113 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 FAM74A4Q5TZK3 123 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 LINC01551Q86U37 167 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 RNASE7Q9H1E1 156 aaKnown RBP8.56□□□□□ -1.04
SNORD55-201ENST00000581525 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
SNORD55-201ENST00000581525 TRBV7-3A0A075B6L6 115 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 A0A087WWC5 75 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 C9JQL5 133 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 NTF3P20783 257 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 UBE2D3P61077 147 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 UBE2D2P62837 147 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 AP1S3Q96PC3 154 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 OSTCQ9NRP0 149 aa8.55□□□□□ -1.04
SNORD55-201ENST00000581525 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 MUC21A0A0G2JKD1 596 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 MUC21A0A140T8X8 626 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 FAM231BA6NCW3 169 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 A8MWL6 223 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 EVI2AP22794 236 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 RPL36AP83881 106 aaKnown RBP8.54□□□□□ -1.04
SNORD55-201ENST00000581525 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
SNORD55-201ENST00000581525 TNP2Q05952 138 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 NEXN-AS1Q8NBZ9 246 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 GTSF1Q8WW33 167 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 RPL36ALQ969Q0 106 aaKnown RBP8.54□□□□□ -1.04
SNORD55-201ENST00000581525 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
SNORD55-201ENST00000581525 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
SNORD55-201ENST00000581525 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
SNORD55-201ENST00000581525 GATCO43716 136 aaKnown RBP8.53□□□□□ -1.04
SNORD55-201ENST00000581525 PEA15Q15121 130 aa8.53□□□□□ -1.04
SNORD55-201ENST00000581525 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
SNORD55-201ENST00000581525 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
SNORD55-201ENST00000581525 GFRA4Q9GZZ7 299 aa8.53□□□□□ -1.04
SNORD55-201ENST00000581525 M0QY20 66 aa8.52□□□□□ -1.05
SNORD55-201ENST00000581525 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
SNORD55-201ENST00000581525 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 CEBPGP53567 150 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 RPL23P62829 140 aaKnown RBP8.51□□□□□ -1.05
SNORD55-201ENST00000581525 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms