RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 CXCL1P09341 107 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 CEBPGP53567 150 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 GAGE1Q13065 139 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 GAGE4Q13068 117 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 GAGE5Q13069 117 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 TPPP3Q9BW30 176 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 PKHD1P08F94 4074 aa9.06□□□□□ -0.96
NUP85-215ENST00000580879 DYNC1H1Q14204 4646 aaKnown RBP9.06□□□□□ -0.96
NUP85-215ENST00000580879 A0A1B0GVY2 172 aa9.05□□□□□ -0.96
NUP85-215ENST00000580879 RHODO00212 210 aa9.05□□□□□ -0.96
NUP85-215ENST00000580879 SNAI2O43623 268 aa9.05□□□□□ -0.96
NUP85-215ENST00000580879 SH2D6Q7Z4S9 175 aa9.05□□□□□ -0.96
NUP85-215ENST00000580879 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
NUP85-215ENST00000580879 A0A1W2PPQ1 181 aa9.04□□□□□ -0.96
NUP85-215ENST00000580879 K7EN84 100 aa9.04□□□□□ -0.96
NUP85-215ENST00000580879 P01737 135 aa9.04□□□□□ -0.96
NUP85-215ENST00000580879 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
NUP85-215ENST00000580879 TNP2Q05952 138 aa9.04□□□□□ -0.96
NUP85-215ENST00000580879 SPANXN1Q5VSR9 72 aa9.04□□□□□ -0.96
NUP85-215ENST00000580879 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
NUP85-215ENST00000580879 EIF5A2Q9GZV4 153 aaKnown RBP9.04□□□□□ -0.96
NUP85-215ENST00000580879 TMEM250H0YL14 139 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 LINC00315P59091 139 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 NUDT10Q8NFP7 164 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 OCC1Q8TAD7 63 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 NUDT11Q96G61 164 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 LY96Q9Y6Y9 160 aa9.03□□□□□ -0.96
NUP85-215ENST00000580879 IGLC6P0CF74 106 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 LINC00694P0DN24 101 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 TIRAPP58753 221 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 RPS20P60866 119 aaKnown RBP9.02□□□□□ -0.97
NUP85-215ENST00000580879 ZNF56Q15929 161 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 FAM210AQ96ND0 272 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 RNASE7Q9H1E1 156 aaKnown RBP9.02□□□□□ -0.97
NUP85-215ENST00000580879 GTSF1LQ9H1H1 148 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 BIN3Q9NQY0 253 aa9.02□□□□□ -0.97
NUP85-215ENST00000580879 DNAH10OSP0CZ25 163 aa9.01□□□□□ -0.97
NUP85-215ENST00000580879 TEX261Q6UWH6 196 aa9.01□□□□□ -0.97
NUP85-215ENST00000580879 MSRB1Q9NZV6 116 aa9.01□□□□□ -0.97
NUP85-215ENST00000580879 TRAV8-6A0A0B4J262 113 aa9□□□□□ -0.97
NUP85-215ENST00000580879 XKRY2A2RUG3 117 aa9□□□□□ -0.97
NUP85-215ENST00000580879 EVI2AP22794 236 aa9□□□□□ -0.97
NUP85-215ENST00000580879 LELP1Q5T871 98 aa9□□□□□ -0.97
NUP85-215ENST00000580879 RPP21Q9H633 154 aaKnown RBP9□□□□□ -0.97
NUP85-215ENST00000580879 TRAV9-2A0A087WT02 112 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 F5H697 171 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 SRP19P09132 144 aaKnown RBP8.99□□□□□ -0.97
NUP85-215ENST00000580879 LYZL1Q6UWQ5 148 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 AP1S3Q96PC3 154 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 SMIM7Q9BQ49 75 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
NUP85-215ENST00000580879 IGHV3-30P01768 117 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 SMIM17P0DL12 118 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 RAB4BP61018 213 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 Q8N3U1 123 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 KIF25-AS1Q9Y6Z4 181 aa8.98□□□□□ -0.97
NUP85-215ENST00000580879 TRBV10-1A0A0K0K1A3 114 aa8.97□□□□□ -0.97
NUP85-215ENST00000580879 ZNF727A8MUV8 499 aa8.97□□□□□ -0.97
NUP85-215ENST00000580879 MGPP08493 103 aa8.97□□□□□ -0.97
NUP85-215ENST00000580879 CACNG7P62955 275 aa8.97□□□□□ -0.97
NUP85-215ENST00000580879 RPL36AP83881 106 aaKnown RBP8.97□□□□□ -0.97
NUP85-215ENST00000580879 LINC01556Q5JQF7 62 aa8.97□□□□□ -0.97
NUP85-215ENST00000580879 Q6ZRN7 208 aaPredicted RBP8.97□□□□□ -0.97
NUP85-215ENST00000580879 NEXN-AS1Q8NBZ9 246 aa8.97□□□□□ -0.97
NUP85-215ENST00000580879 RPL36ALQ969Q0 106 aaKnown RBP8.97□□□□□ -0.97
NUP85-215ENST00000580879 C9JQL5 133 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 F2Z2F3 143 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 GATCO43716 136 aaKnown RBP8.96□□□□□ -0.98
NUP85-215ENST00000580879 BTF3P20290 206 aaKnown RBP8.96□□□□□ -0.98
NUP85-215ENST00000580879 CTRLP40313 264 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 UBE2D3P61077 147 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 UBE2D2P62837 147 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 SRSF3P84103 164 aaKnown RBP8.96□□□□□ -0.98
NUP85-215ENST00000580879 GTSF1Q8WW33 167 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 HERC2O95714 4834 aa8.96□□□□□ -0.98
NUP85-215ENST00000580879 TRBV7-3A0A075B6L6 115 aa8.95□□□□□ -0.98
NUP85-215ENST00000580879 NTF3P20783 257 aa8.95□□□□□ -0.98
NUP85-215ENST00000580879 ERVFC1-1P60608 527 aa8.95□□□□□ -0.98
NUP85-215ENST00000580879 LINC01551Q86U37 167 aa8.95□□□□□ -0.98
NUP85-215ENST00000580879 C10orf126Q8N4M7 172 aa8.95□□□□□ -0.98
NUP85-215ENST00000580879 OR10G8Q8NGN5 311 aa8.95□□□□□ -0.98
NUP85-215ENST00000580879 A0A087WWC5 75 aa8.94□□□□□ -0.98
NUP85-215ENST00000580879 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
NUP85-215ENST00000580879 TWIST1Q15672 202 aa8.94□□□□□ -0.98
NUP85-215ENST00000580879 FAM231DQ6ZW35 169 aa8.94□□□□□ -0.98
NUP85-215ENST00000580879 Q9HAA7 133 aa8.94□□□□□ -0.98
NUP85-215ENST00000580879 LRP1BQ9NZR2 4599 aa8.94□□□□□ -0.98
NUP85-215ENST00000580879 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
NUP85-215ENST00000580879 K7EP13 123 aa8.93□□□□□ -0.98
NUP85-215ENST00000580879 TRGC1P0CF51 173 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms