RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 IGHV3-38A0A0C4DH36 116 aa18.16■□□□□ 0.5
LINC00271-207ENST00000580741 RHODO00212 210 aa18.16■□□□□ 0.5
LINC00271-207ENST00000580741 CRYGDP07320 174 aa18.16■□□□□ 0.5
LINC00271-207ENST00000580741 CENPWQ5EE01 88 aa18.16■□□□□ 0.5
LINC00271-207ENST00000580741 HSPG2P98160 4391 aa18.15■□□□□ 0.5
LINC00271-207ENST00000580741 LINC00694P0DN24 101 aa18.15■□□□□ 0.5
LINC00271-207ENST00000580741 OR10AG1Q8NH19 301 aa18.15■□□□□ 0.5
LINC00271-207ENST00000580741 GTSF1LQ9H1H1 148 aa18.15■□□□□ 0.5
LINC00271-207ENST00000580741 MSRB1Q9NZV6 116 aa18.15■□□□□ 0.5
LINC00271-207ENST00000580741 TRAV8-6A0A0B4J262 113 aa18.14■□□□□ 0.49
LINC00271-207ENST00000580741 RAB19A4D1S5 217 aa18.14■□□□□ 0.49
LINC00271-207ENST00000580741 IFNA1P01562 189 aa18.14■□□□□ 0.49
LINC00271-207ENST00000580741 KRTAP10-2P60368 255 aa18.14■□□□□ 0.49
LINC00271-207ENST00000580741 MEF2BQ02080 365 aaPredicted RBP18.14■□□□□ 0.49
LINC00271-207ENST00000580741 LELP1Q5T871 98 aa18.14■□□□□ 0.49
LINC00271-207ENST00000580741 APOBP04114 4563 aaKnown RBP18.13■□□□□ 0.49
LINC00271-207ENST00000580741 MUC21A0A0G2JKD1 596 aa18.13■□□□□ 0.49
LINC00271-207ENST00000580741 MUC21A0A140T8X8 626 aa18.13■□□□□ 0.49
LINC00271-207ENST00000580741 CXCL1P09341 107 aa18.13■□□□□ 0.49
LINC00271-207ENST00000580741 BCL2P10415 239 aa18.13■□□□□ 0.49
LINC00271-207ENST00000580741 NFE4Q86UQ8 179 aa18.12■□□□□ 0.49
LINC00271-207ENST00000580741 IGLV2-8P01709 118 aa18.11■□□□□ 0.49
LINC00271-207ENST00000580741 LINC01556Q5JQF7 62 aa18.11■□□□□ 0.49
LINC00271-207ENST00000580741 C10orf126Q8N4M7 172 aa18.11■□□□□ 0.49
LINC00271-207ENST00000580741 MED9Q9NWA0 146 aa18.11■□□□□ 0.49
LINC00271-207ENST00000580741 A0A1B0GVG6 124 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 K7EP13 123 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 PDE6DO43924 150 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 IGHV3-30P01768 117 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 IGHV3-33P01772 117 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 IGHV3-30-3P0DP02 117 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 IGHV3-30-5P0DP03 117 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 SSTP61278 116 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 ALKAL2Q6UX46 152 aa18.1■□□□□ 0.49
LINC00271-207ENST00000580741 SNAI2O43623 268 aa18.09■□□□□ 0.49
LINC00271-207ENST00000580741 GNG4P50150 75 aa18.09■□□□□ 0.49
LINC00271-207ENST00000580741 VAX2Q9UIW0 290 aa18.09■□□□□ 0.49
LINC00271-207ENST00000580741 FUSP35637 526 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC00271-207ENST00000580741 NKX2-5P52952 324 aaPredicted RBP18.08■□□□□ 0.48
LINC00271-207ENST00000580741 TRBV20OR9-2A0A075B6H5 130 aa18.07■□□□□ 0.48
LINC00271-207ENST00000580741 GZMBP10144 247 aa18.07■□□□□ 0.48
LINC00271-207ENST00000580741 ERVFC1-1P60608 527 aa18.07■□□□□ 0.48
LINC00271-207ENST00000580741 SPANXN1Q5VSR9 72 aa18.07■□□□□ 0.48
LINC00271-207ENST00000580741 Q8N3U1 123 aa18.07■□□□□ 0.48
LINC00271-207ENST00000580741 SSBP4Q9BWG4 385 aaPredicted RBP18.07■□□□□ 0.48
LINC00271-207ENST00000580741 OR5AL1P0C617 328 aa18.06■□□□□ 0.48
LINC00271-207ENST00000580741 OR2D3Q8NGH3 330 aa18.05■□□□□ 0.48
LINC00271-207ENST00000580741 DAZAP1Q96EP5 407 aaKnown RBP18.05■□□□□ 0.48
LINC00271-207ENST00000580741 C19orf71A6NCJ1 209 aa18.04■□□□□ 0.48
LINC00271-207ENST00000580741 RBFOX3A6NFN3 312 aa18.04■□□□□ 0.48
LINC00271-207ENST00000580741 ZNF56Q15929 161 aa18.04■□□□□ 0.48
LINC00271-207ENST00000580741 TPPP3Q9BW30 176 aa18.04■□□□□ 0.48
LINC00271-207ENST00000580741 Q9HAA7 133 aa18.04■□□□□ 0.48
LINC00271-207ENST00000580741 BOLA1Q9Y3E2 137 aa18.04■□□□□ 0.48
LINC00271-207ENST00000580741 A0A087WTM6 91 aa18.03■□□□□ 0.48
LINC00271-207ENST00000580741 IBA57-AS1B1ANH7 110 aa18.03■□□□□ 0.48
LINC00271-207ENST00000580741 SMIM12Q96EX1 92 aa18.02■□□□□ 0.48
LINC00271-207ENST00000580741 EREGO14944 169 aa18.01■□□□□ 0.47
LINC00271-207ENST00000580741 TAGLN2P37802 199 aaKnown RBP18.01■□□□□ 0.47
LINC00271-207ENST00000580741 TRBV10-1A0A0K0K1A3 114 aa18■□□□□ 0.47
LINC00271-207ENST00000580741 P01737 135 aa18■□□□□ 0.47
LINC00271-207ENST00000580741 RAB4BP61018 213 aa18■□□□□ 0.47
LINC00271-207ENST00000580741 BLOC1S1P78537 153 aa18■□□□□ 0.47
LINC00271-207ENST00000580741 RPL36AP83881 106 aaKnown RBP18■□□□□ 0.47
LINC00271-207ENST00000580741 FER1L6-AS1Q8NA97 138 aa18■□□□□ 0.47
LINC00271-207ENST00000580741 RPL36ALQ969Q0 106 aaKnown RBP18■□□□□ 0.47
LINC00271-207ENST00000580741 A0A087WWC5 75 aa17.99■□□□□ 0.47
LINC00271-207ENST00000580741 IGLC6P0CF74 106 aa17.99■□□□□ 0.47
LINC00271-207ENST00000580741 RPS20P60866 119 aaKnown RBP17.99■□□□□ 0.47
LINC00271-207ENST00000580741 PSCAO43653 123 aa17.98■□□□□ 0.47
LINC00271-207ENST00000580741 UBE2D3P61077 147 aa17.98■□□□□ 0.47
LINC00271-207ENST00000580741 UBE2D2P62837 147 aa17.98■□□□□ 0.47
LINC00271-207ENST00000580741 TRBV7-3A0A075B6L6 115 aa17.97■□□□□ 0.47
LINC00271-207ENST00000580741 F5H697 171 aa17.97■□□□□ 0.47
LINC00271-207ENST00000580741 DAZ4Q86SG3 579 aaKnown RBP17.97■□□□□ 0.47
LINC00271-207ENST00000580741 NEXN-AS1Q8NBZ9 246 aa17.97■□□□□ 0.47
LINC00271-207ENST00000580741 AP1S3Q96PC3 154 aa17.97■□□□□ 0.47
LINC00271-207ENST00000580741 DAZ3Q9NR90 486 aaKnown RBP17.97■□□□□ 0.47
LINC00271-207ENST00000580741 PCLOQ9Y6V0 5065 aa17.96■□□□□ 0.47
LINC00271-207ENST00000580741 KIF25-AS1Q9Y6Z4 181 aa17.96■□□□□ 0.47
LINC00271-207ENST00000580741 CDK2AP2O75956 126 aa17.95■□□□□ 0.46
LINC00271-207ENST00000580741 SMIM17P0DL12 118 aa17.95■□□□□ 0.46
LINC00271-207ENST00000580741 NUDT10Q8NFP7 164 aa17.95■□□□□ 0.46
LINC00271-207ENST00000580741 OR10G8Q8NGN5 311 aa17.95■□□□□ 0.46
LINC00271-207ENST00000580741 NUDT11Q96G61 164 aa17.95■□□□□ 0.46
LINC00271-207ENST00000580741 BIN3Q9NQY0 253 aa17.95■□□□□ 0.46
LINC00271-207ENST00000580741 K7EN84 100 aa17.94■□□□□ 0.46
LINC00271-207ENST00000580741 LYPD6BQ8NI32 183 aa17.94■□□□□ 0.46
LINC00271-207ENST00000580741 KRTAP17-1Q9BYP8 105 aa17.94■□□□□ 0.46
LINC00271-207ENST00000580741 PGPEP1Q9NXJ5 209 aa17.94■□□□□ 0.46
LINC00271-207ENST00000580741 ABCA13Q86UQ4 5058 aa17.93■□□□□ 0.46
LINC00271-207ENST00000580741 XKRY2A2RUG3 117 aa17.93■□□□□ 0.46
LINC00271-207ENST00000580741 MGPP08493 103 aa17.93■□□□□ 0.46
LINC00271-207ENST00000580741 NIT1Q86X76 327 aa17.93■□□□□ 0.46
LINC00271-207ENST00000580741 OCC1Q8TAD7 63 aa17.93■□□□□ 0.46
LINC00271-207ENST00000580741 RNASE7Q9H1E1 156 aaKnown RBP17.93■□□□□ 0.46
LINC00271-207ENST00000580741 LAGE3Q14657 143 aa17.92■□□□□ 0.46
LINC00271-207ENST00000580741 LYZL1Q6UWQ5 148 aa17.92■□□□□ 0.46
LINC00271-207ENST00000580741 LRCOL1A6NCL2 159 aa17.91■□□□□ 0.46
LINC00271-207ENST00000580741 CEBPGP53567 150 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms