RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GZMBP10144 247 aa13.43□□□□□ -0.26
LIMD2-209ENST00000580222 ADCYAP1P18509 176 aa13.43□□□□□ -0.26
LIMD2-209ENST00000580222 XGP55808 180 aa13.43□□□□□ -0.26
LIMD2-209ENST00000580222 PNRC1Q12796 327 aaPredicted RBP13.43□□□□□ -0.26
LIMD2-209ENST00000580222 SFRP2Q96HF1 295 aa13.43□□□□□ -0.26
LIMD2-209ENST00000580222 OSTCQ9NRP0 149 aa13.43□□□□□ -0.26
LIMD2-209ENST00000580222 TRGV2A0A075B6R0 118 aa13.42□□□□□ -0.26
LIMD2-209ENST00000580222 FUSP35637 526 aaKnown RBP eCLIP13.42□□□□□ -0.26
LIMD2-209ENST00000580222 LINC00612Q8N6U2 182 aa13.42□□□□□ -0.26
LIMD2-209ENST00000580222 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
LIMD2-209ENST00000580222 SEC11CQ9BY50 192 aa13.42□□□□□ -0.26
LIMD2-209ENST00000580222 PHLDA3Q9Y5J5 127 aa13.42□□□□□ -0.26
LIMD2-209ENST00000580222 ZNF876PQ49A33 203 aa13.41□□□□□ -0.26
LIMD2-209ENST00000580222 FER1L6-AS1Q8NA97 138 aa13.41□□□□□ -0.26
LIMD2-209ENST00000580222 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
LIMD2-209ENST00000580222 OR10G8Q8NGN5 311 aa13.41□□□□□ -0.26
LIMD2-209ENST00000580222 LINC00588Q9Y4M8 146 aa13.41□□□□□ -0.26
LIMD2-209ENST00000580222 CT83Q5H943 113 aa13.4□□□□□ -0.26
LIMD2-209ENST00000580222 Q5VSD8 79 aa13.4□□□□□ -0.26
LIMD2-209ENST00000580222 A8MWL6 223 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 M0R381 172 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 SNAI2O43623 268 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 ATP5G1P05496 136 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 IGLC6P0CF74 106 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 ZFP82Q8N141 532 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 C15orf53Q8NAA6 179 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 RASL10AQ92737 203 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 V9GYV3 84 aa13.39□□□□□ -0.27
LIMD2-209ENST00000580222 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
LIMD2-209ENST00000580222 OR5AL1P0C617 328 aa13.38□□□□□ -0.27
LIMD2-209ENST00000580222 OR10AG1Q8NH19 301 aa13.38□□□□□ -0.27
LIMD2-209ENST00000580222 PTH2Q96A98 100 aa13.38□□□□□ -0.27
LIMD2-209ENST00000580222 IGHV3-53P01767 116 aa13.37□□□□□ -0.27
LIMD2-209ENST00000580222 SPANXN1Q5VSR9 72 aa13.37□□□□□ -0.27
LIMD2-209ENST00000580222 C18orf15Q96N68 181 aa13.37□□□□□ -0.27
LIMD2-209ENST00000580222 MUC21A0A0G2JKD1 596 aa13.36□□□□□ -0.27
LIMD2-209ENST00000580222 MUC21A0A140T8X8 626 aa13.36□□□□□ -0.27
LIMD2-209ENST00000580222 NDUFA5Q16718 116 aa13.36□□□□□ -0.27
LIMD2-209ENST00000580222 TSKUQ8WUA8 353 aa13.36□□□□□ -0.27
LIMD2-209ENST00000580222 SSBP4Q9BWG4 385 aaPredicted RBP13.36□□□□□ -0.27
LIMD2-209ENST00000580222 TRAV4A0A0B4J268 109 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 F2Z2F3 143 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 F5H768 121 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 PPP1R2P9O14990 202 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 NUDT3O95989 172 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 SSTP61278 116 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 DMRTA1Q5VZB9 504 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 LYZL1Q6UWQ5 148 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 SLC7A5P1Q8MH63 180 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 OR4C5Q8NGB2 326 aa13.35□□□□□ -0.27
LIMD2-209ENST00000580222 CARHSP1Q9Y2V2 147 aaKnown RBP13.35□□□□□ -0.27
LIMD2-209ENST00000580222 MT-ND4LP03901 98 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 BTF3P20290 206 aaKnown RBP13.34□□□□□ -0.27
LIMD2-209ENST00000580222 CTRLP40313 264 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 CACNG7P62955 275 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 PIK3CD-AS1Q5SR53 167 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 GTSF1Q8WW33 167 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 GFRA4Q9GZZ7 299 aa13.34□□□□□ -0.27
LIMD2-209ENST00000580222 A8MWV9 139 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 RS1O15537 224 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 NXPH4O95158 308 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 ANAPC16Q96DE5 110 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 ZNF479Q96JC4 524 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 PGLYRP4Q96LB8 373 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 Q9H8V8 135 aa13.33□□□□□ -0.28
LIMD2-209ENST00000580222 HIGD1CA8MV81 97 aa13.32□□□□□ -0.28
LIMD2-209ENST00000580222 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
LIMD2-209ENST00000580222 BORCS7Q96B45 105 aa13.32□□□□□ -0.28
LIMD2-209ENST00000580222 JPT2Q9H910 190 aa13.32□□□□□ -0.28
LIMD2-209ENST00000580222 TRGV4A0A0C4DH28 118 aa13.31□□□□□ -0.28
LIMD2-209ENST00000580222 FAM231BA6NCW3 169 aa13.31□□□□□ -0.28
LIMD2-209ENST00000580222 SMR3BP02814 79 aaPredicted RBP13.31□□□□□ -0.28
LIMD2-209ENST00000580222 HOXA5P20719 270 aa13.31□□□□□ -0.28
LIMD2-209ENST00000580222 CCL18P55774 89 aa13.31□□□□□ -0.28
LIMD2-209ENST00000580222 AP1S3Q96PC3 154 aa13.31□□□□□ -0.28
LIMD2-209ENST00000580222 APOC3P02656 99 aa13.3□□□□□ -0.28
LIMD2-209ENST00000580222 FAM74A4Q5TZK3 123 aa13.3□□□□□ -0.28
LIMD2-209ENST00000580222 NAT8BQ9UHF3 227 aa13.3□□□□□ -0.28
LIMD2-209ENST00000580222 IGHV3-73A0A0B4J1V6 119 aa13.29□□□□□ -0.28
LIMD2-209ENST00000580222 CIDEAO60543 219 aa13.29□□□□□ -0.28
LIMD2-209ENST00000580222 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
LIMD2-209ENST00000580222 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
LIMD2-209ENST00000580222 FRZBQ92765 325 aa13.29□□□□□ -0.28
LIMD2-209ENST00000580222 A0A087WWL8 130 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 SMIM27A0A1W2PRY6 76 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 RHODO00212 210 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 TRGC1P0CF51 173 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 NTF3P20783 257 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 FHL2Q14192 279 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 TWIST1Q15672 202 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 CLRN3Q8NCR9 226 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 CNFNQ9BYD5 112 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 SAMD10Q9BYL1 202 aa13.28□□□□□ -0.28
LIMD2-209ENST00000580222 SMIM17P0DL12 118 aa13.27□□□□□ -0.29
LIMD2-209ENST00000580222 KRTAP10-1P60331 282 aa13.27□□□□□ -0.29
LIMD2-209ENST00000580222 ZFP2Q6ZN57 461 aa13.27□□□□□ -0.29
LIMD2-209ENST00000580222 SVBPQ8N300 66 aa13.27□□□□□ -0.29
LIMD2-209ENST00000580222 NUP35Q8NFH5 326 aa13.27□□□□□ -0.29
LIMD2-209ENST00000580222 MSRB1Q9NZV6 116 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms