RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
RARA-209ENST00000579727 Q9H8V8 135 aa11.23□□□□□ -0.61
RARA-209ENST00000579727 CIDEAO60543 219 aa11.22□□□□□ -0.61
RARA-209ENST00000579727 NXPH4O95158 308 aa11.22□□□□□ -0.61
RARA-209ENST00000579727 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
RARA-209ENST00000579727 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
RARA-209ENST00000579727 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
RARA-209ENST00000579727 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
RARA-209ENST00000579727 CRYGDP07320 174 aa11.21□□□□□ -0.61
RARA-209ENST00000579727 OR5AL1P0C617 328 aa11.21□□□□□ -0.61
RARA-209ENST00000579727 SRSF3P84103 164 aaKnown RBP11.21□□□□□ -0.61
RARA-209ENST00000579727 FER1L6-AS1Q8NA97 138 aa11.21□□□□□ -0.61
RARA-209ENST00000579727 SMIM7Q9BQ49 75 aa11.21□□□□□ -0.61
RARA-209ENST00000579727 SSBP4Q9BWG4 385 aaPredicted RBP11.21□□□□□ -0.61
RARA-209ENST00000579727 KRTAP1-5Q9BYS1 174 aa11.21□□□□□ -0.61
RARA-209ENST00000579727 Q9UF83 564 aa11.21□□□□□ -0.61
RARA-209ENST00000579727 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 RHODO00212 210 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 RTL8CO15255 209 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
RARA-209ENST00000579727 GAGE1Q13065 139 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 GAGE4Q13068 117 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 GAGE5Q13069 117 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
RARA-209ENST00000579727 DNAH17Q9UFH2 4485 aa11.19□□□□□ -0.62
RARA-209ENST00000579727 C9JQL5 133 aa11.19□□□□□ -0.62
RARA-209ENST00000579727 ZNF56Q15929 161 aa11.19□□□□□ -0.62
RARA-209ENST00000579727 WFDC10BQ8IUB3 73 aa11.19□□□□□ -0.62
RARA-209ENST00000579727 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
RARA-209ENST00000579727 ZNF727A8MUV8 499 aa11.18□□□□□ -0.62
RARA-209ENST00000579727 SIVA1O15304 175 aa11.18□□□□□ -0.62
RARA-209ENST00000579727 MSRB1Q9NZV6 116 aa11.18□□□□□ -0.62
RARA-209ENST00000579727 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
RARA-209ENST00000579727 C1orf134Q5TEV5 83 aa11.17□□□□□ -0.62
RARA-209ENST00000579727 LYZL1Q6UWQ5 148 aa11.17□□□□□ -0.62
RARA-209ENST00000579727 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
RARA-209ENST00000579727 LINC01551Q86U37 167 aa11.16□□□□□ -0.62
RARA-209ENST00000579727 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
RARA-209ENST00000579727 AP1S3Q96PC3 154 aa11.16□□□□□ -0.62
RARA-209ENST00000579727 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.62
RARA-209ENST00000579727 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
RARA-209ENST00000579727 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
RARA-209ENST00000579727 TTC32Q5I0X7 151 aa11.15□□□□□ -0.62
RARA-209ENST00000579727 SH2D6Q7Z4S9 175 aa11.15□□□□□ -0.62
RARA-209ENST00000579727 C6orf223Q8N319 242 aa11.15□□□□□ -0.62
RARA-209ENST00000579727 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 F5H697 171 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
RARA-209ENST00000579727 MGPP08493 103 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 PEA15Q15121 130 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 LY96Q9Y6Y9 160 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 KIF25-AS1Q9Y6Z4 181 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 PKHD1P08F94 4074 aa11.14□□□□□ -0.63
RARA-209ENST00000579727 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 CTRLP40313 264 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 CACNG7P62955 275 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 LINC00336Q6ZUF6 198 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
RARA-209ENST00000579727 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
RARA-209ENST00000579727 F2Z2F3 143 aa11.12□□□□□ -0.63
RARA-209ENST00000579727 NTF3P20783 257 aa11.12□□□□□ -0.63
RARA-209ENST00000579727 RAB4BP61018 213 aa11.12□□□□□ -0.63
RARA-209ENST00000579727 TIRAPP58753 221 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 LINC00315P59091 139 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 RAB14P61106 215 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 RPL23P62829 140 aaKnown RBP11.11□□□□□ -0.63
RARA-209ENST00000579727 ADIRFQ15847 76 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 LELP1Q5T871 98 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
RARA-209ENST00000579727 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
RARA-209ENST00000579727 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
RARA-209ENST00000579727 EVI2AP22794 236 aa11.1□□□□□ -0.63
RARA-209ENST00000579727 RPL36AP83881 106 aaKnown RBP11.1□□□□□ -0.63
RARA-209ENST00000579727 IFITM2Q01629 132 aa11.1□□□□□ -0.63
RARA-209ENST00000579727 TWIST1Q15672 202 aa11.1□□□□□ -0.63
RARA-209ENST00000579727 NEXN-AS1Q8NBZ9 246 aa11.1□□□□□ -0.63
RARA-209ENST00000579727 RPL36ALQ969Q0 106 aaKnown RBP11.1□□□□□ -0.63
RARA-209ENST00000579727 IGHV3-38A0A0C4DH36 116 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 TRBV10-1A0A0K0K1A3 114 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 A8MWL6 223 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 IGHV3-30P01768 117 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 IGHV3-33P01772 117 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 DNAH10OSP0CZ25 163 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 IGHV3-30-3P0DP02 117 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 IGHV3-30-5P0DP03 117 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 TNP2Q05952 138 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 ISOC2Q96AB3 205 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
RARA-209ENST00000579727 UBE2D3P61077 147 aa11.08□□□□□ -0.64
RARA-209ENST00000579727 UBE2D2P62837 147 aa11.08□□□□□ -0.64
RARA-209ENST00000579727 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms