RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 RS1O15537 224 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 CRYGDP07320 174 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 FAM3BP58499 235 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 C12orf74Q32Q52 190 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 SPANXN1Q5VSR9 72 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 KCNIP4Q6PIL6 250 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 ZFP2Q6ZN57 461 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 POM121L12Q8N7R1 296 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 BTF3L4Q96K17 158 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 PGLYRP4Q96LB8 373 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 CELA1Q9UNI1 258 aa7.88□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TRGV1A0A0A0MS02 117 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TRAV4A0A0B4J268 109 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 S100PP25815 95 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 EMP1P54849 157 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 LINC00315P59091 139 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 RIGQ13278 110 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 CFAP126Q5VTH2 177 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 C11orf45Q8TAV5 145 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 FRZBQ92765 325 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 SMCO4Q9NRQ5 59 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
CDK5RAP3-204ENST00000577664 M0R381 172 aa7.86□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TRGC1P0CF51 173 aa7.86□□□□□ -1.15
CDK5RAP3-204ENST00000577664 ELOBQ15370 118 aa7.86□□□□□ -1.15
CDK5RAP3-204ENST00000577664 BORCS7Q96B45 105 aa7.86□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TMEM191AQ9H0A3 160 aa7.86□□□□□ -1.15
CDK5RAP3-204ENST00000577664 MRPL16Q9NX20 251 aaKnown RBP7.86□□□□□ -1.15
CDK5RAP3-204ENST00000577664 GAGE12BA1L429 117 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 RHODO00212 210 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 GAGE7O76087 117 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 S100A8P05109 93 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 GAGE12FP0CL80 117 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 GAGE12GP0CL81 117 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 GAGE12IP0CL82 117 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 DAD1P61803 113 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TWIST1Q15672 202 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 COX19Q49B96 90 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TPPP3Q9BW30 176 aa7.85□□□□□ -1.15
CDK5RAP3-204ENST00000577664 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 TRGV2A0A075B6R0 118 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 MUC21A0A0G2JKD1 596 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 MUC21A0A140T8X8 626 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 ATP5G1P05496 136 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 DEFB130BP0DP73 79 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 DEFB130AP0DP74 79 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 EVI2AP22794 236 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 HBBP68871 147 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 SLAQ13239 276 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 FHL2Q14192 279 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 OR4C5Q8NGB2 326 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 AP1S3Q96PC3 154 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 SAMD10Q9BYL1 202 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 JPT2Q9H910 190 aa7.84□□□□□ -1.15
CDK5RAP3-204ENST00000577664 RAB4BP61018 213 aa7.83□□□□□ -1.16
CDK5RAP3-204ENST00000577664 ZNF479Q96JC4 524 aa7.83□□□□□ -1.16
CDK5RAP3-204ENST00000577664 GNB1LQ9BYB4 327 aa7.83□□□□□ -1.16
CDK5RAP3-204ENST00000577664 DPH3P1Q9H4G8 78 aa7.83□□□□□ -1.16
CDK5RAP3-204ENST00000577664 NACAE9PAV3 2078 aa7.83□□□□□ -1.16
CDK5RAP3-204ENST00000577664 VPS13DQ5THJ4 4388 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 H3BNG1 76 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 GATA1P15976 413 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 RAB4AP20338 218 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 FAM104BQ5XKR9 115 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 SMIM15Q7Z3B0 74 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 C14orf178Q8N769 122 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 FAM210BQ96KR6 192 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 URGCP-MRPS24S4R325 110 aa7.82□□□□□ -1.16
CDK5RAP3-204ENST00000577664 COLCA2A8K830 154 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 LY6G6CO95867 125 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 SMIM17P0DL12 118 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 HOXA5P20719 270 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 NANOS2P60321 138 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 MRPL54Q6P161 138 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TMEM88Q6PEY1 159 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 Q6ZTC4 211 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 CBLN2Q8IUK8 224 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 RNF185Q96GF1 192 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 HHLA3Q9XRX5 114 aa7.81□□□□□ -1.16
CDK5RAP3-204ENST00000577664 A0A087WWL8 130 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TRAV10A0A0B4J240 114 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 CAMPP49913 170 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 CRYBA4P53673 196 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 SSTP61278 116 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 HSPG2P98160 4391 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 FAT2Q9NYQ8 4349 aa7.8□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TGIF2-C20orf24A0A0A6YYL0 155 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TRBV10-1A0A0K0K1A3 114 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 M0QY20 66 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 HLA-DQA1P01909 254 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 MT-ND6P03923 174 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 Q6ZSN1 163 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 MRAP2Q96G30 205 aa7.79□□□□□ -1.16
CDK5RAP3-204ENST00000577664 DEFB131BA0A096LNP1 70 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 1761.1 ms