RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ANGP03950 147 aaKnown RBP5.75□□□□□ -1.49
SMG6-218ENST00000575454 PET100P0DJ07 73 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 UBE2D3P61077 147 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 UBE2D2P62837 147 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 FAM74A4Q5TZK3 123 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 C7orf33Q8WU49 177 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 JPT2Q9H910 190 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 HSPB11Q9Y547 144 aa5.75□□□□□ -1.49
SMG6-218ENST00000575454 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.74□□□□□ -1.49
SMG6-218ENST00000575454 H0YIZ8 118 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 EIF3GO75821 320 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMG6-218ENST00000575454 ARL14EPLP0DKL9 152 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
SMG6-218ENST00000575454 TMEM97Q5BJF2 176 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 DNLZQ5SXM8 178 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 OR10G8Q8NGN5 311 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 SUN5Q8TC36 379 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 LINC01600Q96MT4 127 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 PHLDA3Q9Y5J5 127 aa5.74□□□□□ -1.49
SMG6-218ENST00000575454 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 A0A087WWL8 130 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 H3BVH4 76 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 PANO1I0J062 215 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 SIX6O95475 246 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 ARMS2P0C7Q2 107 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 RPL12P30050 165 aaKnown RBP5.73□□□□□ -1.49
SMG6-218ENST00000575454 RAB2AP61019 212 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
SMG6-218ENST00000575454 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 MZT2BQ6NZ67 158 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 ZFP82Q8N141 532 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 CHCHD5Q9BSY4 110 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 TMEM167BQ9NRX6 74 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 AP5S1Q9NUS5 200 aa5.73□□□□□ -1.49
SMG6-218ENST00000575454 KRBOX1C9JBD0 128 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 HMGB3O15347 200 aaKnown RBP5.72□□□□□ -1.49
SMG6-218ENST00000575454 PTTG1O95997 202 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 MBP02144 154 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 STAG3L2P0CL84 134 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 STAG3L3P0CL85 134 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 TPT1P13693 172 aaKnown RBP5.72□□□□□ -1.49
SMG6-218ENST00000575454 GCHFRP30047 84 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 CDC34P49427 236 aaPredicted RBP5.72□□□□□ -1.49
SMG6-218ENST00000575454 PPP1R1CQ8WVI7 109 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 CCDC32Q9BV29 185 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 SMIM3Q9BZL3 60 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 PRR34Q9NV39 138 aa5.72□□□□□ -1.49
SMG6-218ENST00000575454 A0A087WYN8 130 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 hDV102S1A0JD36 115 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 M0R381 172 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 CXorf1O96002 111 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 RAB4BP61018 213 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 RAB24Q969Q5 203 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 PLAC8Q9NZF1 115 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 ZFP30Q9Y2G7 519 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 ARL2-SNX15V9GYD0 113 aa5.71□□□□□ -1.5
SMG6-218ENST00000575454 TRAV8-4A0A0B4J246 113 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 A0A1W2PRE2 83 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 MPC2O95563 127 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 IFNA7P01567 189 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 P01737 135 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 GZMBP10144 247 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 FAM162BQ5T6X4 162 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 WDR73Q6P4I2 378 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 REG3GQ6UW15 175 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 LINC00269Q8N2A0 174 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 SPACA4Q8TDM5 124 aa5.7□□□□□ -1.5
SMG6-218ENST00000575454 NKX6-2Q9C056 277 aaPredicted RBP5.7□□□□□ -1.5
SMG6-218ENST00000575454 TRBV25-1A0A075B6N4 114 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 GRIFINA4D1Z8 144 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 A6NHS1 94 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 M0R036 132 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 PHOX2AO14813 284 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 GAS8-AS1O95177 125 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 RBX1P62877 108 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 SERF2P84101 59 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 PRR27Q6MZM9 219 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 KRTAP26-1Q6PEX3 210 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 COX8CQ7Z4L0 72 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 GTSF1Q8WW33 167 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 HIST1H2BAQ96A08 127 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 ACTR3CQ9C0K3 210 aaPredicted RBP5.69□□□□□ -1.5
SMG6-218ENST00000575454 WFDC1Q9HC57 220 aa5.69□□□□□ -1.5
SMG6-218ENST00000575454 PEX7O00628 323 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 SH2D1AO60880 128 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 CRIP1P50238 77 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 H2BFSP57053 126 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 REG3AQ06141 175 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 ZNF56Q15929 161 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 SPINK6Q6UWN8 80 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 Q86TA4 180 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 NEXN-AS1Q8NBZ9 246 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 ENKURQ8TC29 256 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms