RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 C20orf173Q96LM9 149 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 SIGMAR1Q99720 223 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 IGLC6P0CF74 106 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 C12orf74Q32Q52 190 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 C11orf71Q6IPW1 123 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 C5orf56Q8N8D9 126 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 OR5A1Q8NGJ0 315 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
RPAIN-215ENST00000575112 ODF3BA8MYP8 253 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 RAB9AP51151 201 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 SRSF2Q01130 221 aaKnown RBP6.49□□□□□ -1.37
RPAIN-215ENST00000575112 ZFP2Q6ZN57 461 aa6.49□□□□□ -1.37
RPAIN-215ENST00000575112 HERVK_113P61574 105 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 PRR9Q5T870 116 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 FOXI2Q6ZQN5 318 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 NFE4Q86UQ8 179 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 LYPD1Q8N2G4 141 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 KIR2DL4Q99706 377 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 ZMAT4Q9H898 229 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 E9PLD3 99 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 SMCPP49901 116 aaPredicted RBP6.48□□□□□ -1.37
RPAIN-215ENST00000575112 KLHL30-AS1Q8NEE0 82 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 TRAV26-1A0A087WT03 109 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 PDE6HQ13956 83 aa6.48□□□□□ -1.37
RPAIN-215ENST00000575112 ITPR2Q14571 2701 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 IGLV2-18A0A075B6J9 118 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 IGHV3-38A0A0C4DH36 116 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 SIVA1O15304 175 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 SRSF8Q9BRL6 282 aaKnown RBP6.47□□□□□ -1.37
RPAIN-215ENST00000575112 PRO0461Q9UI25 63 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 UBR5O95071 2799 aaPredicted RBP6.47□□□□□ -1.37
RPAIN-215ENST00000575112 TRBV7-1A0A0A6YYK4 115 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 HLA-DRB4P13762 266 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 SNRPD3P62318 126 aaKnown RBP6.47□□□□□ -1.37
RPAIN-215ENST00000575112 Q6AWC8 147 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 PLEKHB2Q96CS7 222 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 OPRPNQ99935 248 aaPredicted RBP6.47□□□□□ -1.37
RPAIN-215ENST00000575112 MRPL16Q9NX20 251 aaKnown RBP6.47□□□□□ -1.37
RPAIN-215ENST00000575112 HLA-DRB4X5D2U9 266 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 MUC4Q99102 2169 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
RPAIN-215ENST00000575112 MORN3Q6PF18 240 aaPredicted RBP6.47□□□□□ -1.37
RPAIN-215ENST00000575112 B4DSR2 109 aa6.46□□□□□ -1.37
RPAIN-215ENST00000575112 DPM2O94777 84 aa6.46□□□□□ -1.37
RPAIN-215ENST00000575112 DEFB131AP59861 70 aa6.46□□□□□ -1.37
RPAIN-215ENST00000575112 KRTAP10-9P60411 292 aa6.46□□□□□ -1.37
RPAIN-215ENST00000575112 A0A1B0GWB2 263 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 HOXA3O43365 443 aaPredicted RBP6.46□□□□□ -1.38
RPAIN-215ENST00000575112 MT-ATP8P03928 68 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 FBXL19-AS1Q494R0 122 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 C18orf65Q6ZTR6 163 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
RPAIN-215ENST00000575112 CFHR3Q02985 330 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 LAGE3Q14657 143 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 APRG1Q8IVJ8 170 aa6.46□□□□□ -1.38
RPAIN-215ENST00000575112 OOSP1A8MZH6 123 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 LGALS3P17931 250 aaKnown RBP6.45□□□□□ -1.38
RPAIN-215ENST00000575112 SLURP1P55000 103 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 NRACQ8N912 160 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 SYT8Q8NBV8 401 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 LINC01587Q99440 93 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 DAZ1Q9NQZ3 744 aaKnown RBP6.45□□□□□ -1.38
RPAIN-215ENST00000575112 TOMM7Q9P0U1 55 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 XCL2Q9UBD3 114 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 NBPF19A0A087WUL8 3843 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 MXRA5Q9NR99 2828 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 TRBV6-1A0A0K0K1D8 114 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 A0A1B0GW15 77 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 CKS1BP61024 79 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 GAGE13Q4V321 117 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 ATP6V0BQ99437 205 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 ZFAND3Q9H8U3 227 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
RPAIN-215ENST00000575112 TRAV8-2A0A0B4J237 113 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 SRSF1Q07955 248 aaKnown RBP eCLIP6.44□□□□□ -1.38
RPAIN-215ENST00000575112 ZNF876PQ49A33 203 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 MDFICQ9P1T7 246 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 CLPSL1A2RUU4 121 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 LINC01549A6NIU2 74 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 Q96MF0 132 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
RPAIN-215ENST00000575112 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 IGHV7-4-1A0A0J9YVY3 117 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 ZNF815PA8K554 130 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 ATP5LO75964 103 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 RNASE1P07998 156 aaKnown RBP6.44□□□□□ -1.38
RPAIN-215ENST00000575112 P0DMU3 169 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 FAM231AP0DMU4 169 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 FAM231CP0DMU5 169 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 CRYBA4P53673 196 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 SUMO2P61956 95 aaKnown RBP6.44□□□□□ -1.38
RPAIN-215ENST00000575112 C10orf105Q8TEF2 133 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
RPAIN-215ENST00000575112 A0A1B0GV72 72 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 C2orf66Q6UXQ4 117 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms