RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 UFSP1Q6NVU6 142 aa7.63□□□□□ -1.19
CTNS-208ENST00000574218 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
CTNS-208ENST00000574218 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
CTNS-208ENST00000574218 TRBV7-3A0A075B6L6 115 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 IGHV3-64A0A075B6Q5 118 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 FABP5P3A8MUU1 101 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 B4DEV8 164 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 PANO1I0J062 215 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 HMGB3O15347 200 aaKnown RBP7.62□□□□□ -1.19
CTNS-208ENST00000574218 CYCSP99999 105 aaKnown RBP7.62□□□□□ -1.19
CTNS-208ENST00000574218 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 CLRN3Q8NCR9 226 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 CHCHD5Q9BSY4 110 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 SMIM3Q9BZL3 60 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 AP5S1Q9NUS5 200 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 PHLDA3Q9Y5J5 127 aa7.62□□□□□ -1.19
CTNS-208ENST00000574218 A0A087WWL8 130 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.61□□□□□ -1.19
CTNS-208ENST00000574218 IGKV3D-20A0A0C4DH25 116 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 FAM240BA0A1B0GVZ2 78 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 PLA2G10O15496 165 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 ARL14EPLP0DKL9 152 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 UBE2D3P61077 147 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 UBE2D2P62837 147 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 SDIM1Q6ZPB5 146 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 HSPB11Q9Y547 144 aa7.61□□□□□ -1.19
CTNS-208ENST00000574218 hDV102S1A0JD36 115 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 SIX6O95475 246 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 PTTG1O95997 202 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 ARMS2P0C7Q2 107 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 PET100P0DJ07 73 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 TPT1P13693 172 aaKnown RBP7.6□□□□□ -1.19
CTNS-208ENST00000574218 CDC34P49427 236 aaPredicted RBP7.6□□□□□ -1.19
CTNS-208ENST00000574218 RAB2AP61019 212 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 SUMO1P63165 101 aaKnown RBP7.6□□□□□ -1.19
CTNS-208ENST00000574218 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 SFRP2Q96HF1 295 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 LINC01600Q96MT4 127 aa7.6□□□□□ -1.19
CTNS-208ENST00000574218 A0A087WYN8 130 aa7.59□□□□□ -1.19
CTNS-208ENST00000574218 M0R381 172 aa7.59□□□□□ -1.19
CTNS-208ENST00000574218 PHOX2AO14813 284 aa7.59□□□□□ -1.19
CTNS-208ENST00000574218 GAS8-AS1O95177 125 aa7.59□□□□□ -1.19
CTNS-208ENST00000574218 RBM38Q9H0Z9 239 aaKnown RBP7.59□□□□□ -1.19
CTNS-208ENST00000574218 EPDR1Q9UM22 224 aa7.59□□□□□ -1.19
CTNS-208ENST00000574218 H0YIZ8 118 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 M0R036 132 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 CNBPP62633 177 aaKnown RBP7.58□□□□□ -1.2
CTNS-208ENST00000574218 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
CTNS-208ENST00000574218 TMEM97Q5BJF2 176 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 MZT2BQ6NZ67 158 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 ZFP82Q8N141 532 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 TMEM167BQ9NRX6 74 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
CTNS-208ENST00000574218 GRIFINA4D1Z8 144 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 CHTF8P0CG12 524 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 STAG3L2P0CL84 134 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 STAG3L3P0CL85 134 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 GCHFRP30047 84 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 RPL12P30050 165 aaKnown RBP7.57□□□□□ -1.2
CTNS-208ENST00000574218 ZNF56Q15929 161 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 WDR73Q6P4I2 378 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 REG3GQ6UW15 175 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 LINC00269Q8N2A0 174 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 PPP1R1CQ8WVI7 109 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 GTSF1Q8WW33 167 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 ARL2-SNX15V9GYD0 113 aa7.57□□□□□ -1.2
CTNS-208ENST00000574218 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 IFNA7P01567 189 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 DNLZQ5SXM8 178 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 OR10G8Q8NGN5 311 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 SPACA4Q8TDM5 124 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
CTNS-208ENST00000574218 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 CXorf1O96002 111 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 RAB4BP61018 213 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 RBX1P62877 108 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 GAGE6Q13070 117 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 NEXN-AS1Q8NBZ9 246 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
CTNS-208ENST00000574218 IGLV10-54A0A075B6I4 117 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 TRBV25-1A0A075B6N4 114 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 TMSB15BA0A087X1C1 80 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 SH2D1AO60880 128 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 MBP02144 154 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 FAM162BQ5T6X4 162 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 Q86TA4 180 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 CCDC32Q9BV29 185 aa7.54□□□□□ -1.2
CTNS-208ENST00000574218 TRAV8-4A0A0B4J246 113 aa7.53□□□□□ -1.2
CTNS-208ENST00000574218 A6NHS1 94 aa7.53□□□□□ -1.2
CTNS-208ENST00000574218 MPC2O95563 127 aa7.53□□□□□ -1.2
CTNS-208ENST00000574218 P01737 135 aa7.53□□□□□ -1.2
CTNS-208ENST00000574218 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
CTNS-208ENST00000574218 REG3AQ06141 175 aa7.53□□□□□ -1.2
CTNS-208ENST00000574218 ODF1Q14990 250 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms