RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 TIRAPP58753 221 aa18.89■□□□□ 0.61
SCARF1-207ENST00000573867 FAM74A4Q5TZK3 123 aa18.89■□□□□ 0.61
SCARF1-207ENST00000573867 SH2D6Q7Z4S9 175 aa18.89■□□□□ 0.61
SCARF1-207ENST00000573867 MUC21A0A0G2JKD1 596 aa18.88■□□□□ 0.61
SCARF1-207ENST00000573867 MUC21A0A140T8X8 626 aa18.88■□□□□ 0.61
SCARF1-207ENST00000573867 SMIM12Q96EX1 92 aa18.88■□□□□ 0.61
SCARF1-207ENST00000573867 RHODO00212 210 aa18.87■□□□□ 0.61
SCARF1-207ENST00000573867 GZMBP10144 247 aa18.87■□□□□ 0.61
SCARF1-207ENST00000573867 LINC00315P59091 139 aa18.87■□□□□ 0.61
SCARF1-207ENST00000573867 GAGE12JA6NER3 117 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 RBFOX3A6NFN3 312 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 OR5AL1P0C617 328 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 GAGE1Q13065 139 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 GAGE4Q13068 117 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 GAGE5Q13069 117 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 GAGE13Q4V321 117 aa18.86■□□□□ 0.61
SCARF1-207ENST00000573867 DNAH10OSP0CZ25 163 aa18.84■□□□□ 0.61
SCARF1-207ENST00000573867 OR2D3Q8NGH3 330 aa18.84■□□□□ 0.61
SCARF1-207ENST00000573867 ATP6V0E2Q8NHE4 81 aa18.84■□□□□ 0.61
SCARF1-207ENST00000573867 TNFRSF18Q9Y5U5 241 aa18.84■□□□□ 0.61
SCARF1-207ENST00000573867 IGLC6P0CF74 106 aa18.83■□□□□ 0.6
SCARF1-207ENST00000573867 Q6ZRN7 208 aaPredicted RBP18.83■□□□□ 0.6
SCARF1-207ENST00000573867 LY96Q9Y6Y9 160 aa18.83■□□□□ 0.6
SCARF1-207ENST00000573867 K7EN84 100 aa18.82■□□□□ 0.6
SCARF1-207ENST00000573867 SSTP61278 116 aa18.82■□□□□ 0.6
SCARF1-207ENST00000573867 DAZAP1Q96EP5 407 aaKnown RBP18.82■□□□□ 0.6
SCARF1-207ENST00000573867 TOR2AQ5JU69 321 aa18.81■□□□□ 0.6
SCARF1-207ENST00000573867 GTSF1LQ9H1H1 148 aa18.81■□□□□ 0.6
SCARF1-207ENST00000573867 KIAA1109Q2LD37 5005 aa18.8■□□□□ 0.6
SCARF1-207ENST00000573867 TMEM250H0YL14 139 aa18.8■□□□□ 0.6
SCARF1-207ENST00000573867 BTF3P20290 206 aaKnown RBP18.8■□□□□ 0.6
SCARF1-207ENST00000573867 SPANXN1Q5VSR9 72 aa18.8■□□□□ 0.6
SCARF1-207ENST00000573867 OCC1Q8TAD7 63 aa18.8■□□□□ 0.6
SCARF1-207ENST00000573867 P01737 135 aa18.79■□□□□ 0.6
SCARF1-207ENST00000573867 LELP1Q5T871 98 aa18.79■□□□□ 0.6
SCARF1-207ENST00000573867 NUDT10Q8NFP7 164 aa18.79■□□□□ 0.6
SCARF1-207ENST00000573867 NUDT11Q96G61 164 aa18.79■□□□□ 0.6
SCARF1-207ENST00000573867 HERC2O95714 4834 aa18.79■□□□□ 0.6
SCARF1-207ENST00000573867 RPS20P60866 119 aaKnown RBP18.78■□□□□ 0.6
SCARF1-207ENST00000573867 FER1L6-AS1Q8NA97 138 aa18.78■□□□□ 0.6
SCARF1-207ENST00000573867 IGHV3-38A0A0C4DH36 116 aa18.77■□□□□ 0.6
SCARF1-207ENST00000573867 OR10J3Q5JRS4 329 aa18.77■□□□□ 0.6
SCARF1-207ENST00000573867 FAM210AQ96ND0 272 aa18.77■□□□□ 0.6
SCARF1-207ENST00000573867 TPPP3Q9BW30 176 aa18.77■□□□□ 0.6
SCARF1-207ENST00000573867 KIF25-AS1Q9Y6Z4 181 aa18.77■□□□□ 0.6
SCARF1-207ENST00000573867 EVI2AP22794 236 aa18.76■□□□□ 0.59
SCARF1-207ENST00000573867 RNASE7Q9H1E1 156 aaKnown RBP18.76■□□□□ 0.59
SCARF1-207ENST00000573867 BIN3Q9NQY0 253 aa18.76■□□□□ 0.59
SCARF1-207ENST00000573867 MSRB1Q9NZV6 116 aa18.76■□□□□ 0.59
SCARF1-207ENST00000573867 TRAV8-6A0A0B4J262 113 aa18.74■□□□□ 0.59
SCARF1-207ENST00000573867 CEBPGP53567 150 aa18.74■□□□□ 0.59
SCARF1-207ENST00000573867 RAB4BP61018 213 aa18.74■□□□□ 0.59
SCARF1-207ENST00000573867 LINC01556Q5JQF7 62 aa18.74■□□□□ 0.59
SCARF1-207ENST00000573867 Q8N3U1 123 aa18.74■□□□□ 0.59
SCARF1-207ENST00000573867 EIF5A2Q9GZV4 153 aaKnown RBP18.74■□□□□ 0.59
SCARF1-207ENST00000573867 LRP1BQ9NZR2 4599 aa18.74■□□□□ 0.59
SCARF1-207ENST00000573867 TRAV9-2A0A087WT02 112 aa18.73■□□□□ 0.59
SCARF1-207ENST00000573867 ZNF56Q15929 161 aa18.73■□□□□ 0.59
SCARF1-207ENST00000573867 DNAH5Q8TE73 4624 aa18.72■□□□□ 0.59
SCARF1-207ENST00000573867 TRBV10-1A0A0K0K1A3 114 aa18.72■□□□□ 0.59
SCARF1-207ENST00000573867 TEX261Q6UWH6 196 aa18.72■□□□□ 0.59
SCARF1-207ENST00000573867 LYZL1Q6UWQ5 148 aa18.72■□□□□ 0.59
SCARF1-207ENST00000573867 K7EP13 123 aa18.71■□□□□ 0.59
SCARF1-207ENST00000573867 SRP19P09132 144 aaKnown RBP18.71■□□□□ 0.59
SCARF1-207ENST00000573867 AP1S3Q96PC3 154 aa18.71■□□□□ 0.59
SCARF1-207ENST00000573867 RPP21Q9H633 154 aaKnown RBP18.71■□□□□ 0.59
SCARF1-207ENST00000573867 XKRY2A2RUG3 117 aa18.7■□□□□ 0.58
SCARF1-207ENST00000573867 NDUFS6O75380 124 aaKnown RBP18.7■□□□□ 0.58
SCARF1-207ENST00000573867 UBE2D3P61077 147 aa18.7■□□□□ 0.58
SCARF1-207ENST00000573867 UBE2D2P62837 147 aa18.7■□□□□ 0.58
SCARF1-207ENST00000573867 NEXN-AS1Q8NBZ9 246 aa18.7■□□□□ 0.58
SCARF1-207ENST00000573867 OR10G8Q8NGN5 311 aa18.7■□□□□ 0.58
SCARF1-207ENST00000573867 IGHV3-30P01768 117 aa18.69■□□□□ 0.58
SCARF1-207ENST00000573867 IGHV3-33P01772 117 aa18.69■□□□□ 0.58
SCARF1-207ENST00000573867 IGHV3-30-3P0DP02 117 aa18.69■□□□□ 0.58
SCARF1-207ENST00000573867 IGHV3-30-5P0DP03 117 aa18.69■□□□□ 0.58
SCARF1-207ENST00000573867 CTRLP40313 264 aa18.69■□□□□ 0.58
SCARF1-207ENST00000573867 TRBV7-3A0A075B6L6 115 aa18.68■□□□□ 0.58
SCARF1-207ENST00000573867 CACNG7P62955 275 aa18.68■□□□□ 0.58
SCARF1-207ENST00000573867 RPL36AP83881 106 aaKnown RBP18.68■□□□□ 0.58
SCARF1-207ENST00000573867 RPL36ALQ969Q0 106 aaKnown RBP18.68■□□□□ 0.58
SCARF1-207ENST00000573867 F2Z2F3 143 aa18.67■□□□□ 0.58
SCARF1-207ENST00000573867 C10orf126Q8N4M7 172 aa18.67■□□□□ 0.58
SCARF1-207ENST00000573867 SMIM7Q9BQ49 75 aa18.67■□□□□ 0.58
SCARF1-207ENST00000573867 IBA57-AS1B1ANH7 110 aa18.66■□□□□ 0.58
SCARF1-207ENST00000573867 F5H697 171 aa18.66■□□□□ 0.58
SCARF1-207ENST00000573867 KRTAP10-2P60368 255 aa18.66■□□□□ 0.58
SCARF1-207ENST00000573867 NFE4Q86UQ8 179 aa18.66■□□□□ 0.58
SCARF1-207ENST00000573867 GTSF1Q8WW33 167 aa18.66■□□□□ 0.58
SCARF1-207ENST00000573867 A0A087WWC5 75 aa18.65■□□□□ 0.58
SCARF1-207ENST00000573867 C9JQL5 133 aa18.65■□□□□ 0.58
SCARF1-207ENST00000573867 SMIM17P0DL12 118 aa18.65■□□□□ 0.58
SCARF1-207ENST00000573867 FAM231DQ6ZW35 169 aa18.65■□□□□ 0.58
SCARF1-207ENST00000573867 NTF3P20783 257 aa18.64■□□□□ 0.57
SCARF1-207ENST00000573867 SPATA12Q7Z6I5 190 aa18.64■□□□□ 0.57
SCARF1-207ENST00000573867 LINC01551Q86U37 167 aa18.64■□□□□ 0.57
SCARF1-207ENST00000573867 CNFNQ9BYD5 112 aa18.64■□□□□ 0.57
SCARF1-207ENST00000573867 MGPP08493 103 aa18.63■□□□□ 0.57
SCARF1-207ENST00000573867 SRSF3P84103 164 aaKnown RBP18.63■□□□□ 0.57
SCARF1-207ENST00000573867 ZNF727A8MUV8 499 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms