RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
RAB40B-203ENST00000570676 LINC00612Q8N6U2 182 aa10.58□□□□□ -0.72
RAB40B-203ENST00000570676 NUP35Q8NFH5 326 aa10.58□□□□□ -0.72
RAB40B-203ENST00000570676 OR10AG1Q8NH19 301 aa10.58□□□□□ -0.72
RAB40B-203ENST00000570676 IMMP2LQ96T52 175 aa10.58□□□□□ -0.72
RAB40B-203ENST00000570676 DNAH17Q9UFH2 4485 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 M0R2P5 195 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 ATP5G1P05496 136 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 S100PP25815 95 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 FAM3BP58499 235 aaPredicted RBP10.57□□□□□ -0.72
RAB40B-203ENST00000570676 SSTP61278 116 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 KCNIP4Q6PIL6 250 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 DNAH2Q9P225 4427 aa10.57□□□□□ -0.72
RAB40B-203ENST00000570676 F5H768 121 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 M0R381 172 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 CACNG7P62955 275 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 SPANXN1Q5VSR9 72 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
RAB40B-203ENST00000570676 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
RAB40B-203ENST00000570676 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
RAB40B-203ENST00000570676 SPINK4O60575 86 aa10.55□□□□□ -0.72
RAB40B-203ENST00000570676 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
RAB40B-203ENST00000570676 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
RAB40B-203ENST00000570676 Q6ZTI0 123 aa10.55□□□□□ -0.72
RAB40B-203ENST00000570676 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 PRSS29PA6NIE9 313 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 NXPH4O95158 308 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 NTF3P20783 257 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 TWIST1Q15672 202 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 CBLN2Q8IUK8 224 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 PTH2Q96A98 100 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 SMCO4Q9NRQ5 59 aa10.54□□□□□ -0.72
RAB40B-203ENST00000570676 GAGE12BA1L429 117 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 SCO1O75880 301 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 GAGE7O76087 117 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 RIGQ13278 110 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
RAB40B-203ENST00000570676 RASL10AQ92737 203 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
RAB40B-203ENST00000570676 KIAA1109Q2LD37 5005 aa10.52□□□□□ -0.72
RAB40B-203ENST00000570676 MUC4Q99102 2169 aa10.52□□□□□ -0.72
RAB40B-203ENST00000570676 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.73
RAB40B-203ENST00000570676 NUDT3O95989 172 aa10.52□□□□□ -0.73
RAB40B-203ENST00000570676 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
RAB40B-203ENST00000570676 ZNRF2Q8NHG8 242 aa10.52□□□□□ -0.73
RAB40B-203ENST00000570676 TRGV2A0A075B6R0 118 aa10.51□□□□□ -0.73
RAB40B-203ENST00000570676 HOXA5P20719 270 aa10.51□□□□□ -0.73
RAB40B-203ENST00000570676 TRGC1P0CF51 173 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 CAMPP49913 170 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 ELOBQ15370 118 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 ATP5L2Q7Z4Y8 100 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 JPT2Q9H910 190 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 LINC00588Q9Y4M8 146 aa10.5□□□□□ -0.73
RAB40B-203ENST00000570676 TGIF2-C20orf24A0A0A6YYL0 155 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 A0A1B0GW15 77 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 A0A1B0GXF2 115 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 A8MWV9 139 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 HBBP68871 147 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 SMIM15Q7Z3B0 74 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 YPEL4Q96NS1 127 aa10.49□□□□□ -0.73
RAB40B-203ENST00000570676 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 A0A087WWL8 130 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 RS1O15537 224 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 S100A8P05109 93 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 EVI2AP22794 236 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 CFAP126Q5VTH2 177 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
RAB40B-203ENST00000570676 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 SAMD10Q9BYL1 202 aa10.48□□□□□ -0.73
RAB40B-203ENST00000570676 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 TRBV24-1A0A075B6N3 115 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 NBDYA0A0U1RRE5 68 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 IGHV3-53P01767 116 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 SMIM17P0DL12 118 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 CCL18P55774 89 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 C1orf134Q5TEV5 83 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 C18orf15Q96N68 181 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 PKHD1P08F94 4074 aa10.47□□□□□ -0.73
RAB40B-203ENST00000570676 A0A0J9YY99 117 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 CRYGDP07320 174 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 RAB4BP61018 213 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 RASL11AQ6T310 242 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 ZNF479Q96JC4 524 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 TMEM191AQ9H0A3 160 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.73
RAB40B-203ENST00000570676 PKD1P98161 4303 aa10.46□□□□□ -0.74
RAB40B-203ENST00000570676 IGHV3-73A0A0B4J1V6 119 aa10.45□□□□□ -0.74
RAB40B-203ENST00000570676 H3BNG1 76 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms