RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RHODO00212 210 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 CXCL1P09341 107 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 H2AFB1P0C5Y9 115 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 CCL20P78556 96 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 GAGE1Q13065 139 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 GAGE4Q13068 117 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 GAGE5Q13069 117 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 LAGE3Q14657 143 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 GAGE13Q4V321 117 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 TCTE3Q8IZS6 198 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 Q8N1X5 172 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 SYT8Q8NBV8 401 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 DERL1Q9BUN8 251 aa5.23□□□□□ -1.57
CDH3-209ENST00000569080 A0A087WWL8 130 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 TRAV8-6A0A0B4J262 113 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 M0R381 172 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 SNAI2O43623 268 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 PFDN1O60925 122 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 S100A9P06702 114 aaKnown RBP5.22□□□□□ -1.57
CDH3-209ENST00000569080 KRTAP10-1P60331 282 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 EIF5AP63241 154 aaKnown RBP5.22□□□□□ -1.57
CDH3-209ENST00000569080 FAM74A4Q5TZK3 123 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 ZFP82Q8N141 532 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 OR10AG1Q8NH19 301 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 SSBP4Q9BWG4 385 aaPredicted RBP5.22□□□□□ -1.57
CDH3-209ENST00000569080 PGPEP1Q9NXJ5 209 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 PHLDA3Q9Y5J5 127 aa5.22□□□□□ -1.57
CDH3-209ENST00000569080 IGLV2-8P01709 118 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 IGHV3-33P01772 117 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 RPL35P42766 123 aaKnown RBP5.21□□□□□ -1.58
CDH3-209ENST00000569080 SULT1A2P50226 295 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 XGP55808 180 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 WFDC2Q14508 124 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 PRR27Q6MZM9 219 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 BAGE2Q86Y30 109 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 MANBALQ9NQG1 85 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 GNG13Q9P2W3 67 aa5.21□□□□□ -1.58
CDH3-209ENST00000569080 TRBV20OR9-2A0A075B6H5 130 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 TRBV10-1A0A0K0K1A3 114 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 EREGO14944 169 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 C1QBP02746 253 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 OR5AL1P0C617 328 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 RAB5CP51148 216 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 UBE2D3P61077 147 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 UBE2D2P62837 147 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 CENPWQ5EE01 88 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 Q6ZNX1 250 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 DAZ4Q86SG3 579 aaKnown RBP5.2□□□□□ -1.58
CDH3-209ENST00000569080 OR10G8Q8NGN5 311 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 Q9HAA7 133 aa5.2□□□□□ -1.58
CDH3-209ENST00000569080 DAZ3Q9NR90 486 aaKnown RBP5.2□□□□□ -1.58
CDH3-209ENST00000569080 A0A087WWC5 75 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 C19orf71A6NCJ1 209 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 IGLC6P0CF74 106 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 MEF2BQ02080 365 aaPredicted RBP5.19□□□□□ -1.58
CDH3-209ENST00000569080 NIT1Q86X76 327 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 Q8N814 137 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 NEXN-AS1Q8NBZ9 246 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 DNAJC30Q96LL9 226 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 KIF25-AS1Q9Y6Z4 181 aa5.19□□□□□ -1.58
CDH3-209ENST00000569080 SRRM2Q9UQ35 2752 aaKnown RBP5.18□□□□□ -1.58
CDH3-209ENST00000569080 TRBV7-3A0A075B6L6 115 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 MUC21A0A0G2JKD1 596 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 MUC21A0A140T8X8 626 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 PSCAO43653 123 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 BCL2P10415 239 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 RAB4BP61018 213 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 EIF5AL1Q6IS14 154 aaKnown RBP5.18□□□□□ -1.58
CDH3-209ENST00000569080 SLC51BQ86UW2 128 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 C9orf62Q8N4C0 152 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 NTN5Q8WTR8 489 aaPredicted RBP5.18□□□□□ -1.58
CDH3-209ENST00000569080 SMIM12Q96EX1 92 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
CDH3-209ENST00000569080 IGLV5-52A0A0A0MRZ9 124 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 RAB19A4D1S5 217 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 GZMBP10144 247 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 GCSHP23434 173 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 RPL36AP83881 106 aaKnown RBP5.17□□□□□ -1.58
CDH3-209ENST00000569080 ZNF56Q15929 161 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 ATRAIDQ6UW56 229 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 RPL36ALQ969Q0 106 aaKnown RBP5.17□□□□□ -1.58
CDH3-209ENST00000569080 CHCHD7Q9BUK0 85 aa5.17□□□□□ -1.58
CDH3-209ENST00000569080 TRBV6-8A0A0A6YYG3 113 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 TRAV8-3A0A0A6YYJ7 113 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 RBFOX3A6NFN3 312 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 PDE6DO43924 150 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 GNG4P50150 75 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 HAMPP81172 84 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 SPANXN1Q5VSR9 72 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 Q6ZSA8 131 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 NTM-AS1Q6ZSK4 140 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 AP1S3Q96PC3 154 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 TMEM70Q9BUB7 260 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 TM2D2Q9BX73 214 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 FAM30AQ9NZY2 134 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms