RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 GAGE5Q13069 117 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 GAGE13Q4V321 117 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 GTSF1LQ9H1H1 148 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
EDC3-215ENST00000569007 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
EDC3-215ENST00000569007 LELP1Q5T871 98 aa11.86□□□□□ -0.51
EDC3-215ENST00000569007 CXCL1P09341 107 aa11.85□□□□□ -0.51
EDC3-215ENST00000569007 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
EDC3-215ENST00000569007 KRTAP10-2P60368 255 aa11.85□□□□□ -0.51
EDC3-215ENST00000569007 MEF2BQ02080 365 aaPredicted RBP11.85□□□□□ -0.51
EDC3-215ENST00000569007 LINC01556Q5JQF7 62 aa11.85□□□□□ -0.51
EDC3-215ENST00000569007 C10orf126Q8N4M7 172 aa11.85□□□□□ -0.51
EDC3-215ENST00000569007 OR10AG1Q8NH19 301 aa11.85□□□□□ -0.51
EDC3-215ENST00000569007 IFNA1P01562 189 aa11.84□□□□□ -0.51
EDC3-215ENST00000569007 HSPG2P98160 4391 aa11.83□□□□□ -0.52
EDC3-215ENST00000569007 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
EDC3-215ENST00000569007 PDE6DO43924 150 aa11.83□□□□□ -0.52
EDC3-215ENST00000569007 BCL2P10415 239 aa11.83□□□□□ -0.52
EDC3-215ENST00000569007 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 IGLV2-8P01709 118 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 GNG4P50150 75 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 VAX2Q9UIW0 290 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
EDC3-215ENST00000569007 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
EDC3-215ENST00000569007 SNAI2O43623 268 aa11.81□□□□□ -0.52
EDC3-215ENST00000569007 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
EDC3-215ENST00000569007 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
EDC3-215ENST00000569007 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
EDC3-215ENST00000569007 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
EDC3-215ENST00000569007 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
EDC3-215ENST00000569007 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
EDC3-215ENST00000569007 EREGO14944 169 aa11.8□□□□□ -0.52
EDC3-215ENST00000569007 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
EDC3-215ENST00000569007 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
EDC3-215ENST00000569007 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
EDC3-215ENST00000569007 GZMBP10144 247 aa11.79□□□□□ -0.52
EDC3-215ENST00000569007 SSTP61278 116 aa11.79□□□□□ -0.52
EDC3-215ENST00000569007 ALKAL2Q6UX46 152 aa11.79□□□□□ -0.52
EDC3-215ENST00000569007 DAZAP1Q96EP5 407 aaKnown RBP11.79□□□□□ -0.52
EDC3-215ENST00000569007 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
EDC3-215ENST00000569007 A0A087WTM6 91 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 A0A087WWC5 75 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 TRBV10-1A0A0K0K1A3 114 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 A0A1B0GVG6 124 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 C19orf71A6NCJ1 209 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 TAGLN2P37802 199 aaKnown RBP11.78□□□□□ -0.52
EDC3-215ENST00000569007 Q8N3U1 123 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 OR2D3Q8NGH3 330 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 Q9HAA7 133 aa11.78□□□□□ -0.52
EDC3-215ENST00000569007 FUSP35637 526 aaKnown RBP eCLIP11.77□□□□□ -0.53
EDC3-215ENST00000569007 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.53
EDC3-215ENST00000569007 RAB4BP61018 213 aa11.77□□□□□ -0.53
EDC3-215ENST00000569007 ZNF56Q15929 161 aa11.77□□□□□ -0.53
EDC3-215ENST00000569007 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
EDC3-215ENST00000569007 RBFOX3A6NFN3 312 aa11.76□□□□□ -0.53
EDC3-215ENST00000569007 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
EDC3-215ENST00000569007 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
EDC3-215ENST00000569007 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
EDC3-215ENST00000569007 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
EDC3-215ENST00000569007 PGPEP1Q9NXJ5 209 aa11.76□□□□□ -0.53
EDC3-215ENST00000569007 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 PSCAO43653 123 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 P01737 135 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 IGLC6P0CF74 106 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 UBE2D3P61077 147 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 UBE2D2P62837 147 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 BLOC1S1P78537 153 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
EDC3-215ENST00000569007 F5H697 171 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 LAGE3Q14657 143 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
EDC3-215ENST00000569007 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 BIN3Q9NQY0 253 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
EDC3-215ENST00000569007 KIF25-AS1Q9Y6Z4 181 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
EDC3-215ENST00000569007 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
EDC3-215ENST00000569007 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
EDC3-215ENST00000569007 KRTAP17-1Q9BYP8 105 aa11.73□□□□□ -0.53
EDC3-215ENST00000569007 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
EDC3-215ENST00000569007 CDPF1Q6NVV7 123 aa11.72□□□□□ -0.53
EDC3-215ENST00000569007 NIT1Q86X76 327 aa11.72□□□□□ -0.53
EDC3-215ENST00000569007 NUDT10Q8NFP7 164 aa11.72□□□□□ -0.53
EDC3-215ENST00000569007 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
EDC3-215ENST00000569007 NUDT11Q96G61 164 aa11.72□□□□□ -0.53
EDC3-215ENST00000569007 LRCOL1A6NCL2 159 aa11.71□□□□□ -0.53
EDC3-215ENST00000569007 CACNG7P62955 275 aa11.71□□□□□ -0.53
EDC3-215ENST00000569007 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
EDC3-215ENST00000569007 F2Z2F3 143 aa11.7□□□□□ -0.54
EDC3-215ENST00000569007 K7EN84 100 aa11.7□□□□□ -0.54
EDC3-215ENST00000569007 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
EDC3-215ENST00000569007 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms