RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CDIP1Q9H305 208 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 LOC400499M0QZD8 3231 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 RASL10AQ92737 203 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 KAAG1Q9UBP8 84 aa8.36□□□□□ -1.07
PALB2-206ENST00000568219 THBDP07204 575 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 MRPL23Q16540 153 aaKnown RBP8.35□□□□□ -1.07
PALB2-206ENST00000568219 C9orf139Q6ZV77 190 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 CLEC2BQ92478 149 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 TRBV7-9A0A0J9YWB2 115 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 A0A0J9YY99 117 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 OVOL1O14753 267 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 NRACQ8N912 160 aa8.35□□□□□ -1.07
PALB2-206ENST00000568219 C8orf31Q8N9H6 132 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 RHPN1-AS1Q9BWJ2 59 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 COL4A2P08572 1712 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 TNRC6BQ9UPQ9 1833 aaKnown RBP8.34□□□□□ -1.07
PALB2-206ENST00000568219 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 OVOL3O00110 214 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 CRYGBP07316 175 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
PALB2-206ENST00000568219 SAA4P35542 130 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 Q6ZS92 163 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 OR13C6PQ8NH95 151 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 NDUFA12Q9UI09 145 aa8.34□□□□□ -1.07
PALB2-206ENST00000568219 DNAL4O96015 105 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 ASPMQ8IZT6 3477 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 CCDC168Q8NDH2 2452 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
PALB2-206ENST00000568219 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 TMEM101Q96IK0 257 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 ATMQ13315 3056 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 IGHV3-38A0A0C4DH36 116 aa8.33□□□□□ -1.08
PALB2-206ENST00000568219 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 SPINK13Q1W4C9 94 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 SVIPQ8NHG7 77 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 TMEM190Q8WZ59 177 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 NPFFO15130 113 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 CRLF1O75462 422 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 MRGPRG-AS1Q2M3A8 158 aa8.32□□□□□ -1.08
PALB2-206ENST00000568219 CEMP1Q6PRD7 247 aaPredicted RBP8.32□□□□□ -1.08
PALB2-206ENST00000568219 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
PALB2-206ENST00000568219 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
PALB2-206ENST00000568219 MRPS12O15235 138 aaKnown RBP8.31□□□□□ -1.08
PALB2-206ENST00000568219 SNRPD3P62318 126 aaKnown RBP8.31□□□□□ -1.08
PALB2-206ENST00000568219 FAM110DQ8TAY7 271 aaPredicted RBP8.31□□□□□ -1.08
PALB2-206ENST00000568219 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
PALB2-206ENST00000568219 SYNJ2BPP57105 145 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 PRO0461Q9UI25 63 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 TRBV7-1A0A0A6YYK4 115 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 IGHV3-16A0A0C4DH30 117 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 PRR9Q5T870 116 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 PIFOQ8TCI5 191 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
PALB2-206ENST00000568219 MYO18BQ8IUG5 2567 aa8.3□□□□□ -1.08
PALB2-206ENST00000568219 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 UBE2E1P51965 193 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 IGHV7-4-1A0A0J9YVY3 117 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 TRGV11A0A075B6L2 103 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 A8MZ25 164 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 AJUBAQ96IF1 538 aa8.29□□□□□ -1.08
PALB2-206ENST00000568219 C19orf54Q5BKX5 351 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 CHD8Q9HCK8 2581 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 FN1P02751 2386 aaKnown RBP8.28□□□□□ -1.08
PALB2-206ENST00000568219 TRBV12-3P01733 135 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 HOXD3P31249 432 aaPredicted RBP8.28□□□□□ -1.08
PALB2-206ENST00000568219 HIST1H4AP62805 103 aaKnown RBP8.28□□□□□ -1.08
PALB2-206ENST00000568219 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 Q8N9W7 124 aa8.28□□□□□ -1.08
PALB2-206ENST00000568219 Q6ZSV7 163 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 NPBQ8NG41 125 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 ICOSQ9Y6W8 199 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 M0R1W7 72 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 UBE2D1P51668 147 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 CFAP161Q6P656 301 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 NOTCH2Q04721 2471 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 TRBV10-2A0A0K0K1G8 114 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 TRIAP1O43715 76 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 PRIMA1Q86XR5 153 aa8.27□□□□□ -1.09
PALB2-206ENST00000568219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.26□□□□□ -1.09
PALB2-206ENST00000568219 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
PALB2-206ENST00000568219 RHODO00212 210 aa8.26□□□□□ -1.09
PALB2-206ENST00000568219 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
PALB2-206ENST00000568219 FHL3Q13643 280 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms