RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 Q8N1X5 172 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 NTN5Q8WTR8 489 aaPredicted RBP7.57□□□□□ -1.2
CDH3-206ENST00000567674 C11orf52Q96A22 123 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
CDH3-206ENST00000567674 BIN3Q9NQY0 253 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 SULT1A2P50226 295 aa7.56□□□□□ -1.2
CDH3-206ENST00000567674 OR10J3Q5JRS4 329 aa7.56□□□□□ -1.2
CDH3-206ENST00000567674 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
CDH3-206ENST00000567674 TM2D2Q9BX73 214 aa7.56□□□□□ -1.2
CDH3-206ENST00000567674 TRAV8-3A0A0A6YYJ7 113 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 SMLR1H3BR10 107 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 H3BVH4 76 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 SNAI2O43623 268 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 IFNA1P01562 189 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 C1QBP02746 253 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 RAB4BP61018 213 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 PKIAP61925 76 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.55□□□□□ -1.2
CDH3-206ENST00000567674 OR10G8Q8NGN5 311 aa7.55□□□□□ -1.2
CDH3-206ENST00000567674 A0A087WTM6 91 aa7.54□□□□□ -1.2
CDH3-206ENST00000567674 LOC100131303A0A0U1RQF7 123 aa7.54□□□□□ -1.2
CDH3-206ENST00000567674 XKRY2A2RUG3 117 aa7.54□□□□□ -1.2
CDH3-206ENST00000567674 RPS20P60866 119 aaKnown RBP7.54□□□□□ -1.2
CDH3-206ENST00000567674 RPL36AP83881 106 aaKnown RBP7.54□□□□□ -1.2
CDH3-206ENST00000567674 ELOBQ15370 118 aa7.54□□□□□ -1.2
CDH3-206ENST00000567674 TMEM97Q5BJF2 176 aa7.54□□□□□ -1.2
CDH3-206ENST00000567674 RPL36ALQ969Q0 106 aaKnown RBP7.54□□□□□ -1.2
CDH3-206ENST00000567674 TRBV7-3A0A075B6L6 115 aa7.53□□□□□ -1.2
CDH3-206ENST00000567674 SCO2A0A1W2PP80 73 aa7.53□□□□□ -1.2
CDH3-206ENST00000567674 F2Z2F3 143 aa7.53□□□□□ -1.2
CDH3-206ENST00000567674 M0R036 132 aa7.53□□□□□ -1.2
CDH3-206ENST00000567674 NDUFS6O75380 124 aaKnown RBP7.53□□□□□ -1.2
CDH3-206ENST00000567674 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
CDH3-206ENST00000567674 CCL20P78556 96 aa7.53□□□□□ -1.2
CDH3-206ENST00000567674 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
CDH3-206ENST00000567674 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 PSCAO43653 123 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 MEF2BQ02080 365 aaPredicted RBP7.52□□□□□ -1.21
CDH3-206ENST00000567674 PRR27Q6MZM9 219 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 WDR73Q6P4I2 378 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 Q6ZNX1 250 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 Q6ZSN1 163 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 RMI2Q96E14 147 aa7.52□□□□□ -1.21
CDH3-206ENST00000567674 DAZAP1Q96EP5 407 aaKnown RBP7.52□□□□□ -1.21
CDH3-206ENST00000567674 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
CDH3-206ENST00000567674 M0R381 172 aa7.51□□□□□ -1.21
CDH3-206ENST00000567674 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
CDH3-206ENST00000567674 GNG13Q9P2W3 67 aa7.51□□□□□ -1.21
CDH3-206ENST00000567674 VAX2Q9UIW0 290 aa7.51□□□□□ -1.21
CDH3-206ENST00000567674 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
CDH3-206ENST00000567674 GRIFINA4D1Z8 144 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 LRCOL1A6NCL2 159 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 UBE2D3P61077 147 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 UBE2D2P62837 147 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 CACNG7P62955 275 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 Q0VG73 95 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 GAGE1Q13065 139 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 GAGE4Q13068 117 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 GAGE5Q13069 117 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 KCNIP4Q6PIL6 250 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
CDH3-206ENST00000567674 JPT2Q9H910 190 aa7.5□□□□□ -1.21
CDH3-206ENST00000567674 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
CDH3-206ENST00000567674 C19orf71A6NCJ1 209 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 H7C1H1 209 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 SMIM17P0DL12 118 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 GNG4P50150 75 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 BLOC1S1P78537 153 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 FAM74A4Q5TZK3 123 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 NIT1Q86X76 327 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 C14orf178Q8N769 122 aaPredicted RBP7.49□□□□□ -1.21
CDH3-206ENST00000567674 FRZBQ92765 325 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 DNAJC30Q96LL9 226 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
CDH3-206ENST00000567674 TRBV6-8A0A0A6YYG3 113 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 TMEM250H0YL14 139 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 BCL2P10415 239 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 GCSHP23434 173 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 ATRAIDQ6UW56 229 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 AKAP14Q86UN6 197 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 Q8N814 137 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 LYPD6BQ8NI32 183 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 FAM210AQ96ND0 272 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 TMEM70Q9BUB7 260 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 TNFRSF18Q9Y5U5 241 aa7.48□□□□□ -1.21
CDH3-206ENST00000567674 A0A087WWL8 130 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 A0A087WX48 190 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 TMSB15BA0A087X1C1 80 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 RBFOX3A6NFN3 312 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 IGLV2-8P01709 118 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 CENPWQ5EE01 88 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 C9orf62Q8N4C0 152 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 OR10AG1Q8NH19 301 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
CDH3-206ENST00000567674 A0A1B0GV50 99 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms