RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CCL18P55774 89 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 CLLU1Q5K131 121 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 DAZAP1Q96EP5 407 aaKnown RBP8.54□□□□□ -1.04
RNF40-211ENST00000567365 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 Q9UF83 564 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
RNF40-211ENST00000567365 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
RNF40-211ENST00000567365 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
RNF40-211ENST00000567365 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 RHODO00212 210 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 CTRLP40313 264 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 CEBPGP53567 150 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 LINC00315P59091 139 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 PEA15Q15121 130 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 RHOHQ15669 191 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 FAM74A3Q4VXF1 159 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 LYPD5Q6UWN5 251 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 UBE2DNLQ8IWF7 75 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 FER1L6-AS1Q8NA97 138 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 GTSF1Q8WW33 167 aa8.53□□□□□ -1.04
RNF40-211ENST00000567365 RPP21Q9H633 154 aaKnown RBP8.53□□□□□ -1.04
RNF40-211ENST00000567365 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
RNF40-211ENST00000567365 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
RNF40-211ENST00000567365 TIRAPP58753 221 aa8.52□□□□□ -1.05
RNF40-211ENST00000567365 NEGR1Q7Z3B1 354 aa8.52□□□□□ -1.05
RNF40-211ENST00000567365 C14orf178Q8N769 122 aaPredicted RBP8.52□□□□□ -1.05
RNF40-211ENST00000567365 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 A0A087WWL8 130 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 A0A1W2PPQ1 181 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 F2Z2F3 143 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 SRIP30626 198 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 FOXA3P55318 350 aaPredicted RBP8.51□□□□□ -1.05
RNF40-211ENST00000567365 RPL23P62829 140 aaKnown RBP8.51□□□□□ -1.05
RNF40-211ENST00000567365 CT83Q5H943 113 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 WDR73Q6P4I2 378 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 OSTCQ9NRP0 149 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
RNF40-211ENST00000567365 CACNG7P62955 275 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 TMEM241Q24JQ0 296 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 SPANXN1Q5VSR9 72 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 ISOC2Q96AB3 205 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 PRADC1Q9BSG0 188 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 Q9H8V8 135 aa8.5□□□□□ -1.05
RNF40-211ENST00000567365 IGLV2-18A0A075B6J9 118 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 GATCO43716 136 aaKnown RBP8.49□□□□□ -1.05
RNF40-211ENST00000567365 ERVFC1-1P60608 527 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 RAB14P61106 215 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 FAM74A4Q5TZK3 123 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 SH2D6Q7Z4S9 175 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 NAT8Q9UHE5 227 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 V9GYV3 84 aa8.49□□□□□ -1.05
RNF40-211ENST00000567365 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 A8MWL6 223 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 M0R2N4 97 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 RAB4BP61018 213 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 SOHLH1Q5JUK2 328 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 OR10G8Q8NGN5 311 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 AP1S3Q96PC3 154 aa8.48□□□□□ -1.05
RNF40-211ENST00000567365 FAM231BA6NCW3 169 aa8.47□□□□□ -1.05
RNF40-211ENST00000567365 NTF3P20783 257 aa8.47□□□□□ -1.05
RNF40-211ENST00000567365 TPPP3Q9BW30 176 aa8.47□□□□□ -1.05
RNF40-211ENST00000567365 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
RNF40-211ENST00000567365 GAGE12JA6NER3 117 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 RTL8CO15255 209 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 SIVA1O15304 175 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 EVI2AP22794 236 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 SSTP61278 116 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 GAGE1Q13065 139 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 GAGE4Q13068 117 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 GAGE5Q13069 117 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 GAGE13Q4V321 117 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 TSKUQ8WUA8 353 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 GFRA4Q9GZZ7 299 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.06
RNF40-211ENST00000567365 HERC2O95714 4834 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 DNAH10OSP0CZ25 163 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 UBE2D3P61077 147 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 UBE2D2P62837 147 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 ADIRFQ15847 76 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 ATP6V0E2Q8NHE4 81 aa8.45□□□□□ -1.06
RNF40-211ENST00000567365 HIGD1CA8MV81 97 aa8.44□□□□□ -1.06
RNF40-211ENST00000567365 M0QY20 66 aa8.44□□□□□ -1.06
RNF40-211ENST00000567365 TRGC1P0CF51 173 aa8.44□□□□□ -1.06
RNF40-211ENST00000567365 C15orf54Q8N8G6 183 aa8.44□□□□□ -1.06
RNF40-211ENST00000567365 LRP1BQ9NZR2 4599 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 TRBV7-3A0A075B6L6 115 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 ZNF56Q15929 161 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 TTC32Q5I0X7 151 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 LELP1Q5T871 98 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 PGLYRP4Q96LB8 373 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 DPH3P1Q9H4G8 78 aa8.43□□□□□ -1.06
RNF40-211ENST00000567365 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms