RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PBDC1Q9BVG4 233 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SLC35B3Q9H1N7 401 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 COA4Q9NYJ1 87 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MED11Q9P086 117 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 METTL1Q9UBP6 276 aaKnown RBP-0.34□□□□□ -2.46
CDH1-211ENST00000567320 LAMTOR3Q9UHA4 124 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PTPRQQ9UMZ3 2332 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 ARL2BPQ9Y2Y0 163 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MED31Q9Y3C7 131 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 UFC1Q9Y3C8 167 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 DNAJC15Q9Y5T4 150 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 FAT2Q9NYQ8 4349 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 TANC2Q9HCD6 1990 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PARP14Q460N5 1801 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 XIRP1Q702N8 1843 aaKnown RBP-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PBRM1Q86U86 1689 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MED23Q9ULK4 1368 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PTPN13Q12923 2485 aa-0.35□□□□□ -2.46
CDH1-211ENST00000567320 KIAA0556O60303 1618 aa-0.35□□□□□ -2.46
CDH1-211ENST00000567320 STARD9Q9P2P6 4700 aa-0.35□□□□□ -2.46
CDH1-211ENST00000567320 CHD6Q8TD26 2715 aa-0.35□□□□□ -2.46
CDH1-211ENST00000567320 DOCK1Q14185 1865 aa-0.35□□□□□ -2.46
CDH1-211ENST00000567320 EP300Q09472 2414 aaPredicted RBP-0.35□□□□□ -2.46
CDH1-211ENST00000567320 ARHGEF5Q12774 1597 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 ERCC6L2Q5T890 1561 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 FAT1Q14517 4588 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 OVOS2A0A0G2JMS6 1433 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 ZNF609O15014 1411 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 CASKIN1Q8WXD9 1431 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.35□□□□□ -2.47
CDH1-211ENST00000567320 A0A1W2PRE2 83 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 H3BMG7 143 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 M0R2T5 61 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 MT-ND4LP03901 98 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SDC4P31431 198 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 PPP1R2P41236 205 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 REEP5Q00765 189 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SSBP1Q04837 148 aaKnown RBP-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SPCS2Q15005 226 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 RGS21Q2M5E4 152 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 HSD17B12Q53GQ0 312 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 AKR1C8PQ5T2L2 129 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 CFAP126Q5VTH2 177 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 STX12Q86Y82 276 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 FAM24BQ8N5W8 94 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 OR13C6PQ8NH95 151 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 THEM6Q8WUY1 208 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 PPDPFLQ8WWR9 84 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 CEP19Q96LK0 163 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 CFAP53Q96M91 514 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SPRR2FQ96RM1 72 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SDF2Q99470 211 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 WFDC6Q9BQY6 131 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 FXYD6Q9H0Q3 95 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 BANF2Q9H503 90 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 PARVGQ9HBI0 331 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 TP53AIP1Q9HCN2 124 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 BATF3Q9NR55 127 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SCN3BQ9NY72 215 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 NDUFA12Q9UI09 145 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 LSM2Q9Y333 95 aaKnown RBP-0.35□□□□□ -2.47
CDH1-211ENST00000567320 NOP16Q9Y3C1 178 aaKnown RBP-0.35□□□□□ -2.47
CDH1-211ENST00000567320 NUBP2Q9Y5Y2 271 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 V9GYV3 84 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 CHD9Q3L8U1 2897 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 AKAP6Q13023 2319 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 HMGXB3Q12766 1538 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 PKD1L1Q8TDX9 2849 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 EIF3AQ14152 1382 aaKnown RBP-0.35□□□□□ -2.47
CDH1-211ENST00000567320 LRRC37A3O60309 1634 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 SHROOM2Q13796 1616 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 WDR7Q9Y4E6 1490 aa-0.35□□□□□ -2.47
CDH1-211ENST00000567320 WNK3Q9BYP7 1800 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 SCN7AQ01118 1682 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 KIF21AQ7Z4S6 1674 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 RIMS1Q86UR5 1692 aaKnown RBP-0.36□□□□□ -2.47
CDH1-211ENST00000567320 YTHDC2Q9H6S0 1430 aaKnown RBP-0.36□□□□□ -2.47
CDH1-211ENST00000567320 DOPEY2Q9Y3R5 2298 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 TULP4Q9NRJ4 1543 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 A0A0D9SFI3 127 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 TRBV6-1A0A0K0K1D8 114 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 FAM236AA0A1B0GUQ0 79 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 FAM236BA0A1B0GV22 79 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 SMIM23A6NLE4 172 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 TMEM238C9JI98 176 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 E7EQ34 232 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 J3KT08 172 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 M0R2P5 195 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 UQCRQO14949 82 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 IFNA21P01568 189 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 G0S2P27469 103 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 SERPINB1P30740 379 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 RPL22P35268 128 aaKnown RBP-0.36□□□□□ -2.47
CDH1-211ENST00000567320 CCL18P55774 89 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 PLGLB1Q02325 96 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 SPA17Q15506 151 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 OR8B8Q15620 311 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 CLLU1Q5K131 121 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 LINC01545Q5VT33 79 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms