RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 IGHV3-33P01772 117 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 IGHV3-30-3P0DP02 117 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 IGHV3-30-5P0DP03 117 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 TMUB2Q71RG4 321 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 Q8N1X5 172 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 SFRP2Q96HF1 295 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 SAMD10Q9BYL1 202 aa13.41□□□□□ -0.26
TRADD-204ENST00000566104 CXCL1P09341 107 aa13.4□□□□□ -0.26
TRADD-204ENST00000566104 EIF5AL1Q6IS14 154 aaKnown RBP13.4□□□□□ -0.26
TRADD-204ENST00000566104 MANBALQ9NQG1 85 aa13.4□□□□□ -0.26
TRADD-204ENST00000566104 BAGE2Q86Y30 109 aa13.39□□□□□ -0.27
TRADD-204ENST00000566104 C14orf178Q8N769 122 aaPredicted RBP13.39□□□□□ -0.27
TRADD-204ENST00000566104 KRTAP4-5Q9BYR2 181 aa13.39□□□□□ -0.27
TRADD-204ENST00000566104 Q9HAA7 133 aa13.39□□□□□ -0.27
TRADD-204ENST00000566104 A0A087WWL8 130 aa13.38□□□□□ -0.27
TRADD-204ENST00000566104 TEX46H3BTG2 121 aa13.38□□□□□ -0.27
TRADD-204ENST00000566104 RAB5CP51148 216 aa13.38□□□□□ -0.27
TRADD-204ENST00000566104 DNAH5Q8TE73 4624 aa13.38□□□□□ -0.27
TRADD-204ENST00000566104 APOBP04114 4563 aaKnown RBP13.37□□□□□ -0.27
TRADD-204ENST00000566104 TOR2AQ5JU69 321 aa13.37□□□□□ -0.27
TRADD-204ENST00000566104 MLST8Q9BVC4 326 aa13.37□□□□□ -0.27
TRADD-204ENST00000566104 ABCA13Q86UQ4 5058 aa13.37□□□□□ -0.27
TRADD-204ENST00000566104 TRBV10-1A0A0K0K1A3 114 aa13.36□□□□□ -0.27
TRADD-204ENST00000566104 FUSP35637 526 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRADD-204ENST00000566104 NTN5Q8WTR8 489 aaPredicted RBP13.36□□□□□ -0.27
TRADD-204ENST00000566104 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
TRADD-204ENST00000566104 RPL36AP83881 106 aaKnown RBP13.35□□□□□ -0.27
TRADD-204ENST00000566104 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
TRADD-204ENST00000566104 RPL36ALQ969Q0 106 aaKnown RBP13.35□□□□□ -0.27
TRADD-204ENST00000566104 GNG13Q9P2W3 67 aa13.35□□□□□ -0.27
TRADD-204ENST00000566104 URGCP-MRPS24S4R325 110 aa13.35□□□□□ -0.27
TRADD-204ENST00000566104 TRAV8-3A0A0A6YYJ7 113 aa13.34□□□□□ -0.27
TRADD-204ENST00000566104 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
TRADD-204ENST00000566104 LRCOL1A6NCL2 159 aa13.34□□□□□ -0.27
TRADD-204ENST00000566104 RPL35P42766 123 aaKnown RBP13.34□□□□□ -0.27
TRADD-204ENST00000566104 Q9UF83 564 aa13.34□□□□□ -0.27
TRADD-204ENST00000566104 GCSHP23434 173 aa13.33□□□□□ -0.28
TRADD-204ENST00000566104 RPL19P84098 196 aaKnown RBP13.33□□□□□ -0.28
TRADD-204ENST00000566104 C11orf52Q96A22 123 aa13.33□□□□□ -0.28
TRADD-204ENST00000566104 IGLV5-52A0A0A0MRZ9 124 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 SNAI2O43623 268 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 OR5AL1P0C617 328 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 RAB4BP61018 213 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 ZNF56Q15929 161 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 TCTE3Q8IZS6 198 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 OR10AG1Q8NH19 301 aa13.32□□□□□ -0.28
TRADD-204ENST00000566104 TRBV7-3A0A075B6L6 115 aa13.31□□□□□ -0.28
TRADD-204ENST00000566104 IFNA1P01562 189 aa13.31□□□□□ -0.28
TRADD-204ENST00000566104 SPANXN1Q5VSR9 72 aa13.31□□□□□ -0.28
TRADD-204ENST00000566104 Q8N814 137 aa13.31□□□□□ -0.28
TRADD-204ENST00000566104 COX11Q9Y6N1 276 aa13.31□□□□□ -0.28
TRADD-204ENST00000566104 SULT1A2P50226 295 aa13.3□□□□□ -0.28
TRADD-204ENST00000566104 KCNIP4Q6PIL6 250 aa13.3□□□□□ -0.28
TRADD-204ENST00000566104 DAZ4Q86SG3 579 aaKnown RBP13.3□□□□□ -0.28
TRADD-204ENST00000566104 Q8N3U1 123 aa13.3□□□□□ -0.28
TRADD-204ENST00000566104 RMI2Q96E14 147 aa13.3□□□□□ -0.28
TRADD-204ENST00000566104 SMIM12Q96EX1 92 aa13.3□□□□□ -0.28
TRADD-204ENST00000566104 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
TRADD-204ENST00000566104 SSBP4Q9BWG4 385 aaPredicted RBP13.3□□□□□ -0.28
TRADD-204ENST00000566104 DAZ3Q9NR90 486 aaKnown RBP13.3□□□□□ -0.28
TRADD-204ENST00000566104 KRTAP10-1P60331 282 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 UBE2D3P61077 147 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 UBE2D2P62837 147 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 CCL20P78556 96 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 CENPWQ5EE01 88 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 NIT1Q86X76 327 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.29□□□□□ -0.28
TRADD-204ENST00000566104 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 DERL1Q9BUN8 251 aa13.29□□□□□ -0.28
TRADD-204ENST00000566104 A0A087WX48 190 aa13.28□□□□□ -0.28
TRADD-204ENST00000566104 PDE6DO43924 150 aa13.28□□□□□ -0.28
TRADD-204ENST00000566104 MEF2BQ02080 365 aaPredicted RBP13.28□□□□□ -0.28
TRADD-204ENST00000566104 ELOBQ15370 118 aa13.28□□□□□ -0.28
TRADD-204ENST00000566104 SLC51BQ86UW2 128 aa13.28□□□□□ -0.28
TRADD-204ENST00000566104 AP1S3Q96PC3 154 aa13.28□□□□□ -0.28
TRADD-204ENST00000566104 EPM2AB3EWF7 344 aa13.27□□□□□ -0.29
TRADD-204ENST00000566104 C1QBP02746 253 aa13.27□□□□□ -0.29
TRADD-204ENST00000566104 SMIM17P0DL12 118 aa13.27□□□□□ -0.29
TRADD-204ENST00000566104 XGP55808 180 aa13.27□□□□□ -0.29
TRADD-204ENST00000566104 DAZAP1Q96EP5 407 aaKnown RBP13.27□□□□□ -0.29
TRADD-204ENST00000566104 GNG4P50150 75 aa13.26□□□□□ -0.29
TRADD-204ENST00000566104 RPS20P60866 119 aaKnown RBP13.26□□□□□ -0.29
TRADD-204ENST00000566104 TMEM70Q9BUB7 260 aa13.26□□□□□ -0.29
TRADD-204ENST00000566104 XKRY2A2RUG3 117 aa13.25□□□□□ -0.29
TRADD-204ENST00000566104 TAGLN2P37802 199 aaKnown RBP13.25□□□□□ -0.29
TRADD-204ENST00000566104 BIN3Q9NQY0 253 aa13.25□□□□□ -0.29
TRADD-204ENST00000566104 MUC21A0A0G2JKD1 596 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 MUC21A0A140T8X8 626 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 F5H697 171 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 BCL2P10415 239 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 FRZBQ92765 325 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 KLK12Q9UKR0 248 aa13.24□□□□□ -0.29
TRADD-204ENST00000566104 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
TRADD-204ENST00000566104 RBFOX3A6NFN3 312 aa13.23□□□□□ -0.29
TRADD-204ENST00000566104 PKIAP61925 76 aa13.23□□□□□ -0.29
TRADD-204ENST00000566104 TMEM97Q5BJF2 176 aa13.23□□□□□ -0.29
TRADD-204ENST00000566104 FER1L6-AS1Q8NA97 138 aa13.23□□□□□ -0.29
TRADD-204ENST00000566104 OR2D3Q8NGH3 330 aa13.23□□□□□ -0.29
TRADD-204ENST00000566104 TPPP3Q9BW30 176 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms