RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SRIP30626 198 aa14.57□□□□□ -0.08
SHCBP1-205ENST00000566016 ESRGQ1W209 222 aa14.57□□□□□ -0.08
SHCBP1-205ENST00000566016 NEGR1Q7Z3B1 354 aa14.57□□□□□ -0.08
SHCBP1-205ENST00000566016 SH2D6Q7Z4S9 175 aa14.57□□□□□ -0.08
SHCBP1-205ENST00000566016 UPK3BQ9BT76 320 aa14.57□□□□□ -0.08
SHCBP1-205ENST00000566016 CT83Q5H943 113 aa14.56□□□□□ -0.08
SHCBP1-205ENST00000566016 MRPS16Q9Y3D3 137 aaKnown RBP14.56□□□□□ -0.08
SHCBP1-205ENST00000566016 CTRLP40313 264 aa14.55□□□□□ -0.08
SHCBP1-205ENST00000566016 CACNG7P62955 275 aa14.55□□□□□ -0.08
SHCBP1-205ENST00000566016 TMEM241Q24JQ0 296 aa14.55□□□□□ -0.08
SHCBP1-205ENST00000566016 ZNRF2Q8NHG8 242 aa14.55□□□□□ -0.08
SHCBP1-205ENST00000566016 ERVFC1-1P60608 527 aa14.54□□□□□ -0.08
SHCBP1-205ENST00000566016 FAM74A4Q5TZK3 123 aa14.54□□□□□ -0.08
SHCBP1-205ENST00000566016 AP1S3Q96PC3 154 aa14.54□□□□□ -0.08
SHCBP1-205ENST00000566016 TPPP3Q9BW30 176 aa14.54□□□□□ -0.08
SHCBP1-205ENST00000566016 CNFNQ9BYD5 112 aa14.54□□□□□ -0.08
SHCBP1-205ENST00000566016 A0A087WWL8 130 aa14.53□□□□□ -0.08
SHCBP1-205ENST00000566016 SOHLH1Q5JUK2 328 aa14.53□□□□□ -0.08
SHCBP1-205ENST00000566016 WDR73Q6P4I2 378 aa14.53□□□□□ -0.08
SHCBP1-205ENST00000566016 NAT8Q9UHE5 227 aa14.53□□□□□ -0.08
SHCBP1-205ENST00000566016 LOC100131303A0A0U1RQF7 123 aa14.52□□□□□ -0.08
SHCBP1-205ENST00000566016 GATCO43716 136 aaKnown RBP14.52□□□□□ -0.08
SHCBP1-205ENST00000566016 Q6ZSN1 163 aa14.52□□□□□ -0.08
SHCBP1-205ENST00000566016 OSTCQ9NRP0 149 aa14.52□□□□□ -0.08
SHCBP1-205ENST00000566016 MUC21A0A0G2JKD1 596 aa14.51□□□□□ -0.09
SHCBP1-205ENST00000566016 MUC21A0A140T8X8 626 aa14.51□□□□□ -0.09
SHCBP1-205ENST00000566016 A8MWL6 223 aa14.51□□□□□ -0.09
SHCBP1-205ENST00000566016 TIRAPP58753 221 aa14.51□□□□□ -0.09
SHCBP1-205ENST00000566016 LYZL1Q6UWQ5 148 aa14.51□□□□□ -0.09
SHCBP1-205ENST00000566016 RPL23P62829 140 aaKnown RBP14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 LYPD5Q6UWN5 251 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 ISOC2Q96AB3 205 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 LINC00694P0DN24 101 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 RAB4BP61018 213 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 Q6ZR54 194 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 GTSF1Q8WW33 167 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 KIF25-AS1Q9Y6Z4 181 aa14.5□□□□□ -0.09
SHCBP1-205ENST00000566016 TRBV10-1A0A0K0K1A3 114 aa14.49□□□□□ -0.09
SHCBP1-205ENST00000566016 FAM231BA6NCW3 169 aa14.49□□□□□ -0.09
SHCBP1-205ENST00000566016 FOXA3P55318 350 aaPredicted RBP14.49□□□□□ -0.09
SHCBP1-205ENST00000566016 C14orf178Q8N769 122 aaPredicted RBP14.49□□□□□ -0.09
SHCBP1-205ENST00000566016 C15orf54Q8N8G6 183 aa14.49□□□□□ -0.09
SHCBP1-205ENST00000566016 GFRA4Q9GZZ7 299 aa14.49□□□□□ -0.09
SHCBP1-205ENST00000566016 SMIM17P0DL12 118 aa14.48□□□□□ -0.09
SHCBP1-205ENST00000566016 Q9H8V8 135 aa14.48□□□□□ -0.09
SHCBP1-205ENST00000566016 IGLV2-18A0A075B6J9 118 aa14.47□□□□□ -0.09
SHCBP1-205ENST00000566016 TRGC1P0CF51 173 aa14.47□□□□□ -0.09
SHCBP1-205ENST00000566016 ADIRFQ15847 76 aa14.47□□□□□ -0.09
SHCBP1-205ENST00000566016 TSKUQ8WUA8 353 aa14.47□□□□□ -0.09
SHCBP1-205ENST00000566016 MSRB1Q9NZV6 116 aa14.47□□□□□ -0.09
SHCBP1-205ENST00000566016 NTF3P20783 257 aa14.46□□□□□ -0.09
SHCBP1-205ENST00000566016 SSTP61278 116 aa14.46□□□□□ -0.09
SHCBP1-205ENST00000566016 ZNF56Q15929 161 aa14.46□□□□□ -0.09
SHCBP1-205ENST00000566016 V9GYV3 84 aa14.46□□□□□ -0.09
SHCBP1-205ENST00000566016 NBDYA0A0U1RRE5 68 aa14.45□□□□□ -0.1
SHCBP1-205ENST00000566016 LINC00315P59091 139 aa14.45□□□□□ -0.1
SHCBP1-205ENST00000566016 ATP6V0E2Q8NHE4 81 aa14.45□□□□□ -0.1
SHCBP1-205ENST00000566016 TTC32Q5I0X7 151 aa14.44□□□□□ -0.1
SHCBP1-205ENST00000566016 UQCC3Q6UW78 93 aa14.44□□□□□ -0.1
SHCBP1-205ENST00000566016 OR10G8Q8NGN5 311 aa14.44□□□□□ -0.1
SHCBP1-205ENST00000566016 GTSF1LQ9H1H1 148 aa14.44□□□□□ -0.1
SHCBP1-205ENST00000566016 Q9UF83 564 aa14.44□□□□□ -0.1
SHCBP1-205ENST00000566016 GAGE12JA6NER3 117 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 M0R2N4 97 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 SIVA1O15304 175 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 EVI2AP22794 236 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 GAGE1Q13065 139 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 GAGE4Q13068 117 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 GAGE5Q13069 117 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 GAGE13Q4V321 117 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 DPH3P1Q9H4G8 78 aa14.43□□□□□ -0.1
SHCBP1-205ENST00000566016 TRBV7-3A0A075B6L6 115 aa14.42□□□□□ -0.1
SHCBP1-205ENST00000566016 HIGD1CA8MV81 97 aa14.42□□□□□ -0.1
SHCBP1-205ENST00000566016 RPL36AP83881 106 aaKnown RBP14.42□□□□□ -0.1
SHCBP1-205ENST00000566016 PNRC1Q12796 327 aaPredicted RBP14.42□□□□□ -0.1
SHCBP1-205ENST00000566016 TWIST1Q15672 202 aa14.42□□□□□ -0.1
SHCBP1-205ENST00000566016 RPL36ALQ969Q0 106 aaKnown RBP14.42□□□□□ -0.1
SHCBP1-205ENST00000566016 F5H697 171 aa14.41□□□□□ -0.1
SHCBP1-205ENST00000566016 PGLYRP4Q96LB8 373 aa14.41□□□□□ -0.1
SHCBP1-205ENST00000566016 FRAS1Q86XX4 4008 aa14.4□□□□□ -0.1
SHCBP1-205ENST00000566016 LELP1Q5T871 98 aa14.4□□□□□ -0.1
SHCBP1-205ENST00000566016 BORCS7Q96B45 105 aa14.4□□□□□ -0.1
SHCBP1-205ENST00000566016 DNAH10Q8IVF4 4471 aa14.39□□□□□ -0.11
SHCBP1-205ENST00000566016 A0A1B0GUT8 65 aa14.39□□□□□ -0.11
SHCBP1-205ENST00000566016 H7C1H1 209 aa14.39□□□□□ -0.11
SHCBP1-205ENST00000566016 K7EP13 123 aa14.39□□□□□ -0.11
SHCBP1-205ENST00000566016 DNAH2Q9P225 4427 aa14.39□□□□□ -0.11
SHCBP1-205ENST00000566016 A0A087WWC5 75 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 MGPP08493 103 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 BTF3P20290 206 aaKnown RBP14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 UBE2D3P61077 147 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 UBE2D2P62837 147 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 NEXN-AS1Q8NBZ9 246 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 M0QY20 66 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 DNAH10OSP0CZ25 163 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 SMIM15Q7Z3B0 74 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 WFDC10BQ8IUB3 73 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 KRTAP1-5Q9BYS1 174 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 NAT8BQ9UHF3 227 aa14.38□□□□□ -0.11
SHCBP1-205ENST00000566016 TRAV8-6A0A0B4J262 113 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms