RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 UFSP1Q6NVU6 142 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 OR10AG1Q8NH19 301 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 TPPP3Q9BW30 176 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 PLECQ15149 4684 aaKnown RBP8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 KMT2CQ8NEZ4 4911 aaKnown RBP8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 IGHV3-73A0A0B4J1V6 119 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 TRBV10-1A0A0K0K1A3 114 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 TRGC1P0CF51 173 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 TIRAPP58753 221 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 ESRGQ1W209 222 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 FAM74A4Q5TZK3 123 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 UQCC3Q6UW78 93 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 LYZL1Q6UWQ5 148 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 AP1S3Q96PC3 154 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 UPK3BQ9BT76 320 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
SHCBP1-204ENST00000565887 GZMBP10144 247 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 CTRLP40313 264 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 RPL23P62829 140 aaKnown RBP8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 SAMD10Q9BYL1 202 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 JPT2Q9H910 190 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 LINC00588Q9Y4M8 146 aa8.72□□□□□ -1.01
SHCBP1-204ENST00000565887 A0A087WWL8 130 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 NTF3P20783 257 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 PNRC1Q12796 327 aaPredicted RBP8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 ADIRFQ15847 76 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 OR10G8Q8NGN5 311 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 TSKUQ8WUA8 353 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 ISOC2Q96AB3 205 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 Q9H8V8 135 aa8.71□□□□□ -1.02
SHCBP1-204ENST00000565887 K7EP13 123 aa8.7□□□□□ -1.02
SHCBP1-204ENST00000565887 TWIST1Q15672 202 aa8.7□□□□□ -1.02
SHCBP1-204ENST00000565887 C14orf178Q8N769 122 aaPredicted RBP8.7□□□□□ -1.02
SHCBP1-204ENST00000565887 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.7□□□□□ -1.02
SHCBP1-204ENST00000565887 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
SHCBP1-204ENST00000565887 ZNRF2Q8NHG8 242 aa8.7□□□□□ -1.02
SHCBP1-204ENST00000565887 ALMS1Q8TCU4 4167 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 F5H697 171 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 H7C1H1 209 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 BTF3P20290 206 aaKnown RBP8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 SSTP61278 116 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 RPL36AP83881 106 aaKnown RBP8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 Q6ZSN1 163 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 RPL36ALQ969Q0 106 aaKnown RBP8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 DPH3P1Q9H4G8 78 aa8.69□□□□□ -1.02
SHCBP1-204ENST00000565887 TRBV7-3A0A075B6L6 115 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 A0A087WWC5 75 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 ZNF56Q15929 161 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 V9GYV3 84 aa8.68□□□□□ -1.02
SHCBP1-204ENST00000565887 TRAV8-6A0A0B4J262 113 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 A0A1B0GUT8 65 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 HIGD1CA8MV81 97 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 SIVA1O15304 175 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 RIGQ13278 110 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 FRZBQ92765 325 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 PGLYRP4Q96LB8 373 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 NAT8BQ9UHF3 227 aa8.67□□□□□ -1.02
SHCBP1-204ENST00000565887 LINC00862A6NCI5 91 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 EVI2AP22794 236 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 GAGE1Q13065 139 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 GAGE4Q13068 117 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 GAGE5Q13069 117 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 GAGE13Q4V321 117 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 ANAPC16Q96DE5 110 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 DNAH1Q9P2D7 4330 aa8.66□□□□□ -1.02
SHCBP1-204ENST00000565887 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 A0A1B0GW15 77 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 SMIM27A0A1W2PRY6 76 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 TMEM218A2RU14 115 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 LINC00315P59091 139 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 LELP1Q5T871 98 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 Q6ZR54 194 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 TNFRSF18Q9Y5U5 241 aa8.65□□□□□ -1.02
SHCBP1-204ENST00000565887 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
SHCBP1-204ENST00000565887 MGPP08493 103 aa8.64□□□□□ -1.03
SHCBP1-204ENST00000565887 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
SHCBP1-204ENST00000565887 F8W036 122 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 M0QY20 66 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 M0R2N4 97 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 S100A8P05109 93 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 UBE2D3P61077 147 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms