RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 CASC2Q6XLA1 102 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 LYPD6Q86Y78 171 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 LINC00474Q9P2X8 69 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 ATP10BO94823 1461 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 CUX1P39880 1505 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 SETBP1Q9Y6X0 1596 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 PREX2Q70Z35 1606 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 LAMB4A4D0S4 1761 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 SLX4Q8IY92 1834 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 EML5Q05BV3 1969 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 DOCK9Q9BZ29 2069 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 IQGAP3Q86VI3 1631 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 MEGF6O75095 1541 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 WFDC2Q14508 124 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 C9orf116Q5BN46 136 aaPredicted RBP2.8□□□□□ -1.96
CHD9-214ENST00000565119 SLC48A1Q6P1K1 146 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 C18orf32Q8TCD1 76 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 CYP4F30PQ9H0H9 118 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 MINOS1-NBL1R4GNA1 71 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 S4R3C0 116 aa2.8□□□□□ -1.96
CHD9-214ENST00000565119 CPAMD8Q8IZJ3 1885 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 IGHV3OR16-8A0A075B7F1 116 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 TCRBV4S1A1TA0A5B7 111 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 RNASE2P10153 161 aaKnown RBP2.79□□□□□ -1.96
CHD9-214ENST00000565119 GNG11P61952 73 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 UBE2G1P62253 170 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 MPV17LQ2QL34 196 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 OR8B2Q96RD0 313 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 TANC1Q9C0D5 1861 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 PATJQ8NI35 1801 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 SHANK3Q9BYB0 1731 aa2.79□□□□□ -1.96
CHD9-214ENST00000565119 ABCC1P33527 1531 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 PTPRMP28827 1452 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 CASP8AP2Q9UKL3 1982 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 TRPM7Q96QT4 1865 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 SCN4AP35499 1836 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 KIAA1549LQ6ZVL6 1849 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 KANTRA0A1W2PQU2 76 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 A6NIN4 97 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 ODF3BA8MYP8 253 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 BCE1O60756 84 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 S100A7L2Q5SY68 101 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 OR8B3Q8NGG8 313 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 MYO5CQ9NQX4 1742 aa2.78□□□□□ -1.96
CHD9-214ENST00000565119 KCPQ6ZWJ8 1503 aa2.78□□□□□ -1.97
CHD9-214ENST00000565119 CLTCQ00610 1675 aaKnown RBP2.77□□□□□ -1.97
CHD9-214ENST00000565119 IGLV4-69A0A075B6H9 119 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 TRBV7-1A0A0A6YYK4 115 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 TRAV13-2A0A0B4J235 113 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 TRBV10-3A0A0K0K1G6 114 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 ERC2-IT1O76042 136 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 P0C880 135 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 CXCL8P10145 99 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 SPATA45Q537H7 98 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 RPL7L1Q6DKI1 246 aaKnown RBP2.77□□□□□ -1.97
CHD9-214ENST00000565119 KRTAP26-1Q6PEX3 210 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 LYPD5Q6UWN5 251 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 ZCCHC23Q6ZST2 131 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 TMEM254Q8TBM7 123 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 CYSTM1Q9H1C7 97 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 NXT2Q9NPJ8 142 aaKnown RBP2.77□□□□□ -1.97
CHD9-214ENST00000565119 KDM6BO15054 1643 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 TARBP1Q13395 1621 aaKnown RBP2.77□□□□□ -1.97
CHD9-214ENST00000565119 ABCA9Q8IUA7 1624 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 UNC13BO14795 1591 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 MYO16Q9Y6X6 1858 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 CDK12Q9NYV4 1490 aaPredicted RBP2.77□□□□□ -1.97
CHD9-214ENST00000565119 SHANK2Q9UPX8 1470 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 RGPD2P0DJD1 1756 aa2.77□□□□□ -1.97
CHD9-214ENST00000565119 EDC4Q6P2E9 1401 aaKnown RBP2.76□□□□□ -1.97
CHD9-214ENST00000565119 MYO3AQ8NEV4 1616 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 IGLV2-18A0A075B6J9 118 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 A0A087WWC5 75 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 MUC21A0A140T8X8 626 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 CRYM-AS1A6NIL9 109 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 H7BZZ5 65 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 PMCHL1Q16048 86 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 EFCAB5A4FU69 1503 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 DUOX2Q9NRD8 1548 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 MUC22E2RYF6 1773 aaPredicted RBP2.76□□□□□ -1.97
CHD9-214ENST00000565119 LRRC9Q6ZRR7 1453 aa2.76□□□□□ -1.97
CHD9-214ENST00000565119 LRP5O75197 1615 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 MADDQ8WXG6 1647 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 PLXNA1Q9UIW2 1896 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 LTBP2Q14767 1821 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 RGPD8O14715 1765 aaPredicted RBP2.75□□□□□ -1.97
CHD9-214ENST00000565119 KDM3BQ7LBC6 1761 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 RGPD5Q99666 1765 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 IGKV3D-11A0A0A0MRZ8 115 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 TRAV10A0A0B4J240 114 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 CXorf51AA0A1B0GTR3 108 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 HCG22E2RYF7 251 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 H3BUT2 72 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 WISP3O95389 354 aaPredicted RBP2.75□□□□□ -1.97
CHD9-214ENST00000565119 IGKV3-11P04433 115 aa2.75□□□□□ -1.97
CHD9-214ENST00000565119 SNRPFP62306 86 aaKnown RBP2.75□□□□□ -1.97
CHD9-214ENST00000565119 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms