RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 LY96Q9Y6Y9 160 aa19.23■□□□□ 0.67
NME3-203ENST00000563367 TAGLN2P37802 199 aaKnown RBP19.22■□□□□ 0.67
NME3-203ENST00000563367 LYPD6BQ8NI32 183 aa19.22■□□□□ 0.67
NME3-203ENST00000563367 SSBP4Q9BWG4 385 aaPredicted RBP19.22■□□□□ 0.67
NME3-203ENST00000563367 TNFRSF18Q9Y5U5 241 aa19.22■□□□□ 0.67
NME3-203ENST00000563367 MUC21A0A0G2JKD1 596 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 MUC21A0A140T8X8 626 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 GAGE12JA6NER3 117 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 SNAI2O43623 268 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 DNAH10OSP0CZ25 163 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 LINC00694P0DN24 101 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 GAGE1Q13065 139 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 GAGE4Q13068 117 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 GAGE5Q13069 117 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 GAGE13Q4V321 117 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 ATP6V0E2Q8NHE4 81 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 SMIM12Q96EX1 92 aa19.21■□□□□ 0.67
NME3-203ENST00000563367 C19orf71A6NCJ1 209 aa19.2■□□□□ 0.66
NME3-203ENST00000563367 OR5AL1P0C617 328 aa19.19■□□□□ 0.66
NME3-203ENST00000563367 Q6ZRN7 208 aaPredicted RBP19.19■□□□□ 0.66
NME3-203ENST00000563367 GTSF1LQ9H1H1 148 aa19.19■□□□□ 0.66
NME3-203ENST00000563367 GZMBP10144 247 aa19.18■□□□□ 0.66
NME3-203ENST00000563367 DAZAP1Q96EP5 407 aaKnown RBP19.18■□□□□ 0.66
NME3-203ENST00000563367 TRAV9-2A0A087WT02 112 aa19.17■□□□□ 0.66
NME3-203ENST00000563367 RBFOX3A6NFN3 312 aa19.17■□□□□ 0.66
NME3-203ENST00000563367 EVI2AP22794 236 aa19.17■□□□□ 0.66
NME3-203ENST00000563367 SSTP61278 116 aa19.16■□□□□ 0.66
NME3-203ENST00000563367 OR10J3Q5JRS4 329 aa19.16■□□□□ 0.66
NME3-203ENST00000563367 LELP1Q5T871 98 aa19.16■□□□□ 0.66
NME3-203ENST00000563367 OR2D3Q8NGH3 330 aa19.16■□□□□ 0.66
NME3-203ENST00000563367 IGHV3-38A0A0C4DH36 116 aa19.15■□□□□ 0.66
NME3-203ENST00000563367 SPANXN1Q5VSR9 72 aa19.15■□□□□ 0.66
NME3-203ENST00000563367 TRAV8-6A0A0B4J262 113 aa19.14■□□□□ 0.65
NME3-203ENST00000563367 K7EP13 123 aa19.13■□□□□ 0.65
NME3-203ENST00000563367 IGLC6P0CF74 106 aa19.13■□□□□ 0.65
NME3-203ENST00000563367 RPS20P60866 119 aaKnown RBP19.13■□□□□ 0.65
NME3-203ENST00000563367 KIAA1109Q2LD37 5005 aa19.12■□□□□ 0.65
NME3-203ENST00000563367 P01737 135 aa19.12■□□□□ 0.65
NME3-203ENST00000563367 LINC01556Q5JQF7 62 aa19.12■□□□□ 0.65
NME3-203ENST00000563367 OCC1Q8TAD7 63 aa19.12■□□□□ 0.65
NME3-203ENST00000563367 MSRB1Q9NZV6 116 aa19.12■□□□□ 0.65
NME3-203ENST00000563367 K7EN84 100 aa19.11■□□□□ 0.65
NME3-203ENST00000563367 TPPP3Q9BW30 176 aa19.11■□□□□ 0.65
NME3-203ENST00000563367 BIN3Q9NQY0 253 aa19.11■□□□□ 0.65
NME3-203ENST00000563367 TMEM250H0YL14 139 aa19.1■□□□□ 0.65
NME3-203ENST00000563367 RAB4BP61018 213 aa19.1■□□□□ 0.65
NME3-203ENST00000563367 FER1L6-AS1Q8NA97 138 aa19.1■□□□□ 0.65
NME3-203ENST00000563367 NUDT10Q8NFP7 164 aa19.1■□□□□ 0.65
NME3-203ENST00000563367 NUDT11Q96G61 164 aa19.1■□□□□ 0.65
NME3-203ENST00000563367 TOR2AQ5JU69 321 aa19.09■□□□□ 0.65
NME3-203ENST00000563367 KIF25-AS1Q9Y6Z4 181 aa19.09■□□□□ 0.65
NME3-203ENST00000563367 HERC2O95714 4834 aa19.08■□□□□ 0.65
NME3-203ENST00000563367 TRBV10-1A0A0K0K1A3 114 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 IGHV3-30P01768 117 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 IGHV3-33P01772 117 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 IGHV3-30-3P0DP02 117 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 IGHV3-30-5P0DP03 117 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 ZNF56Q15929 161 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 NFE4Q86UQ8 179 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 C10orf126Q8N4M7 172 aa19.08■□□□□ 0.64
NME3-203ENST00000563367 SPATA12Q7Z6I5 190 aa19.07■□□□□ 0.64
NME3-203ENST00000563367 RNASE7Q9H1E1 156 aaKnown RBP19.07■□□□□ 0.64
NME3-203ENST00000563367 Q8N3U1 123 aa19.06■□□□□ 0.64
NME3-203ENST00000563367 XKRY2A2RUG3 117 aa19.05■□□□□ 0.64
NME3-203ENST00000563367 UBE2D3P61077 147 aa19.05■□□□□ 0.64
NME3-203ENST00000563367 UBE2D2P62837 147 aa19.05■□□□□ 0.64
NME3-203ENST00000563367 EIF5A2Q9GZV4 153 aaKnown RBP19.05■□□□□ 0.64
NME3-203ENST00000563367 TRBV7-3A0A075B6L6 115 aa19.04■□□□□ 0.64
NME3-203ENST00000563367 CEBPGP53567 150 aa19.04■□□□□ 0.64
NME3-203ENST00000563367 KRTAP10-2P60368 255 aa19.04■□□□□ 0.64
NME3-203ENST00000563367 RPL36AP83881 106 aaKnown RBP19.04■□□□□ 0.64
NME3-203ENST00000563367 OR10G8Q8NGN5 311 aa19.04■□□□□ 0.64
NME3-203ENST00000563367 RPL36ALQ969Q0 106 aaKnown RBP19.04■□□□□ 0.64
NME3-203ENST00000563367 FAM210AQ96ND0 272 aa19.04■□□□□ 0.64
NME3-203ENST00000563367 AP1S3Q96PC3 154 aa19.04■□□□□ 0.64
NME3-203ENST00000563367 A0A087WWC5 75 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 C16orf90A8MZG2 172 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 IBA57-AS1B1ANH7 110 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 F5H697 171 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 CACNG7P62955 275 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 LYZL1Q6UWQ5 148 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 NEXN-AS1Q8NBZ9 246 aa19.03■□□□□ 0.64
NME3-203ENST00000563367 F2Z2F3 143 aa19.02■□□□□ 0.64
NME3-203ENST00000563367 SMIM17P0DL12 118 aa19.02■□□□□ 0.64
NME3-203ENST00000563367 RPP21Q9H633 154 aaKnown RBP19.02■□□□□ 0.64
NME3-203ENST00000563367 LRP1BQ9NZR2 4599 aa19■□□□□ 0.63
NME3-203ENST00000563367 NDUFS6O75380 124 aaKnown RBP18.99■□□□□ 0.63
NME3-203ENST00000563367 TEX261Q6UWH6 196 aa18.99■□□□□ 0.63
NME3-203ENST00000563367 DNAH5Q8TE73 4624 aa18.98■□□□□ 0.63
NME3-203ENST00000563367 SRP19P09132 144 aaKnown RBP18.98■□□□□ 0.63
NME3-203ENST00000563367 CTRLP40313 264 aa18.98■□□□□ 0.63
NME3-203ENST00000563367 ERVFC1-1P60608 527 aa18.98■□□□□ 0.63
NME3-203ENST00000563367 Q9HAA7 133 aa18.98■□□□□ 0.63
NME3-203ENST00000563367 MGPP08493 103 aa18.97■□□□□ 0.63
NME3-203ENST00000563367 NTF3P20783 257 aa18.97■□□□□ 0.63
NME3-203ENST00000563367 SMIM7Q9BQ49 75 aa18.97■□□□□ 0.63
NME3-203ENST00000563367 A0A087WTM6 91 aa18.96■□□□□ 0.63
NME3-203ENST00000563367 DAZ4Q86SG3 579 aaKnown RBP18.96■□□□□ 0.63
NME3-203ENST00000563367 GTSF1Q8WW33 167 aa18.96■□□□□ 0.63
NME3-203ENST00000563367 DAZ3Q9NR90 486 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms