RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 ZNF575Q86XF7 245 aa16.72■□□□□ 0.27
TMEM249-201ENST00000561638 TSKUQ8WUA8 353 aa16.72■□□□□ 0.27
TMEM249-201ENST00000561638 ORAOV1Q8WV07 137 aa16.72■□□□□ 0.27
TMEM249-201ENST00000561638 SPXQ9BT56 116 aa16.72■□□□□ 0.27
TMEM249-201ENST00000561638 U3KQK5 164 aa16.72■□□□□ 0.27
TMEM249-201ENST00000561638 COL7A1Q02388 2944 aa16.71■□□□□ 0.27
TMEM249-201ENST00000561638 DAZ2Q13117 558 aaKnown RBP16.71■□□□□ 0.27
TMEM249-201ENST00000561638 DMRTA1Q5VZB9 504 aa16.71■□□□□ 0.27
TMEM249-201ENST00000561638 C9orf85Q96MD7 179 aa16.71■□□□□ 0.27
TMEM249-201ENST00000561638 TRGV1A0A0A0MS02 117 aa16.7■□□□□ 0.26
TMEM249-201ENST00000561638 FAM222AQ5U5X8 452 aa16.7■□□□□ 0.26
TMEM249-201ENST00000561638 IL17DQ8TAD2 202 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 GTSF1Q8WW33 167 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 VAMP8Q9BV40 100 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 MUC21A0A0G2JKD1 596 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 MUC21A0A140T8X8 626 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 HIGD1CA8MV81 97 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 M0R2P5 195 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 IGLC6P0CF74 106 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 SPART-AS1P0CW21 52 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 MED14OSP0DP75 135 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 TEX43Q6ZNM6 134 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 GFRA4Q9GZZ7 299 aa16.69■□□□□ 0.26
TMEM249-201ENST00000561638 MRPL16Q9NX20 251 aaKnown RBP16.69■□□□□ 0.26
TMEM249-201ENST00000561638 LYRM9A8MSI8 78 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 K7EP13 123 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 M0R381 172 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 OR5AL1P0C617 328 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 ZNF876PQ49A33 203 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 DKK2Q9UBU2 259 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 DNAH9Q9NYC9 4486 aa16.68■□□□□ 0.26
TMEM249-201ENST00000561638 TRAV9-1A0A075B6T8 112 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 F2Z2F3 143 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 DEFB130BP0DP73 79 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 DEFB130AP0DP74 79 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 SPANXN1Q5VSR9 72 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 LYZL1Q6UWQ5 148 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 OR10AG1Q8NH19 301 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 PGLYRP4Q96LB8 373 aa16.67■□□□□ 0.26
TMEM249-201ENST00000561638 TEX48A0A1B0GUV7 120 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 FAM231BA6NCW3 169 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 Q6ZTI0 123 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 SYT8Q8NBV8 401 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 SSBP4Q9BWG4 385 aaPredicted RBP16.66■□□□□ 0.26
TMEM249-201ENST00000561638 SCRT2Q9NQ03 307 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 NAT8BQ9UHF3 227 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 CELA1Q9UNI1 258 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 HUWE1Q7Z6Z7 4374 aaKnown RBP16.66■□□□□ 0.26
TMEM249-201ENST00000561638 SNAI2O43623 268 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 SPINK4O60575 86 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 LGALS9BQ3B8N2 356 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 BORCS7Q96B45 105 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 STAB2Q8WWQ8 2551 aa16.66■□□□□ 0.26
TMEM249-201ENST00000561638 GAGE12BA1L429 117 aa16.65■□□□□ 0.26
TMEM249-201ENST00000561638 GAGE7O76087 117 aa16.65■□□□□ 0.26
TMEM249-201ENST00000561638 GAGE12FP0CL80 117 aa16.65■□□□□ 0.26
TMEM249-201ENST00000561638 GAGE12GP0CL81 117 aa16.65■□□□□ 0.26
TMEM249-201ENST00000561638 GAGE12IP0CL82 117 aa16.65■□□□□ 0.26
TMEM249-201ENST00000561638 TRGV2A0A075B6R0 118 aa16.64■□□□□ 0.25
TMEM249-201ENST00000561638 SMIM27A0A1W2PRY6 76 aa16.64■□□□□ 0.25
TMEM249-201ENST00000561638 CTRLP40313 264 aa16.64■□□□□ 0.25
TMEM249-201ENST00000561638 ESDP10768 282 aa16.64■□□□□ 0.25
TMEM249-201ENST00000561638 DAD1P61803 113 aa16.64■□□□□ 0.25
TMEM249-201ENST00000561638 C11orf45Q8TAV5 145 aa16.64■□□□□ 0.25
TMEM249-201ENST00000561638 PTTG1IPP53801 180 aa16.63■□□□□ 0.25
TMEM249-201ENST00000561638 FOXA3P55318 350 aaPredicted RBP16.63■□□□□ 0.25
TMEM249-201ENST00000561638 NUP35Q8NFH5 326 aa16.63■□□□□ 0.25
TMEM249-201ENST00000561638 RASL10AQ92737 203 aa16.63■□□□□ 0.25
TMEM249-201ENST00000561638 TRAPPC1Q9Y5R8 145 aa16.63■□□□□ 0.25
TMEM249-201ENST00000561638 CACNG7P62955 275 aa16.62■□□□□ 0.25
TMEM249-201ENST00000561638 UQCR10Q9UDW1 63 aa16.62■□□□□ 0.25
TMEM249-201ENST00000561638 MUC4Q99102 2169 aa16.62■□□□□ 0.25
TMEM249-201ENST00000561638 TWIST1Q15672 202 aa16.61■□□□□ 0.25
TMEM249-201ENST00000561638 A0A1B0GUT8 65 aa16.6■□□□□ 0.25
TMEM249-201ENST00000561638 PPBPP02775 128 aa16.6■□□□□ 0.25
TMEM249-201ENST00000561638 NTF3P20783 257 aa16.59■□□□□ 0.25
TMEM249-201ENST00000561638 RBX1P62877 108 aa16.59■□□□□ 0.25
TMEM249-201ENST00000561638 PET117Q6UWS5 81 aa16.59■□□□□ 0.25
TMEM249-201ENST00000561638 PTH2Q96A98 100 aa16.59■□□□□ 0.25
TMEM249-201ENST00000561638 NANOS2P60321 138 aaKnown RBP16.59■□□□□ 0.25
TMEM249-201ENST00000561638 CNFNQ9BYD5 112 aa16.59■□□□□ 0.25
TMEM249-201ENST00000561638 NXPH4O95158 308 aa16.58■□□□□ 0.24
TMEM249-201ENST00000561638 COX19Q49B96 90 aa16.58■□□□□ 0.24
TMEM249-201ENST00000561638 PIK3CD-AS1Q5SR53 167 aa16.58■□□□□ 0.24
TMEM249-201ENST00000561638 LINC00612Q8N6U2 182 aa16.58■□□□□ 0.24
TMEM249-201ENST00000561638 EDA2RQ9HAV5 297 aa16.58■□□□□ 0.24
TMEM249-201ENST00000561638 UBE2V1Q13404 147 aa16.57■□□□□ 0.24
TMEM249-201ENST00000561638 C12orf74Q32Q52 190 aa16.57■□□□□ 0.24
TMEM249-201ENST00000561638 MSRB1Q9NZV6 116 aa16.57■□□□□ 0.24
TMEM249-201ENST00000561638 CHTOPQ9Y3Y2 248 aaKnown RBP16.57■□□□□ 0.24
TMEM249-201ENST00000561638 TGP01266 2768 aa16.57■□□□□ 0.24
TMEM249-201ENST00000561638 A8MWV9 139 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 IGHV3-53P01767 116 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 WDR73Q6P4I2 378 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 OR4C5Q8NGB2 326 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 AP1S3Q96PC3 154 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 IGHV4-4A0A075B6R2 117 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 RIGQ13278 110 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 FAM74A4Q5TZK3 123 aa16.56■□□□□ 0.24
TMEM249-201ENST00000561638 JPT2Q9H910 190 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms