RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 MSRB1Q9NZV6 116 aa16.13■□□□□ 0.17
CDR2-202ENST00000561630 BOLA1Q9Y3E2 137 aa16.13■□□□□ 0.17
CDR2-202ENST00000561630 GAGE12JA6NER3 117 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 GAGE1Q13065 139 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 GAGE4Q13068 117 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 GAGE5Q13069 117 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 GAGE13Q4V321 117 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 LINC01556Q5JQF7 62 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 OR10J3Q5JRS4 329 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 FAM74A4Q5TZK3 123 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 C14orf178Q8N769 122 aaPredicted RBP16.12■□□□□ 0.17
CDR2-202ENST00000561630 Q9UF83 564 aa16.12■□□□□ 0.17
CDR2-202ENST00000561630 A0A087WWL8 130 aa16.11■□□□□ 0.17
CDR2-202ENST00000561630 IFNA1P01562 189 aa16.11■□□□□ 0.17
CDR2-202ENST00000561630 MEF2BQ02080 365 aaPredicted RBP16.11■□□□□ 0.17
CDR2-202ENST00000561630 PDE6DO43924 150 aa16.1■□□□□ 0.17
CDR2-202ENST00000561630 SSBP4Q9BWG4 385 aaPredicted RBP16.1■□□□□ 0.17
CDR2-202ENST00000561630 BCL2P10415 239 aa16.09■□□□□ 0.17
CDR2-202ENST00000561630 KRTAP10-2P60368 255 aa16.09■□□□□ 0.17
CDR2-202ENST00000561630 CENPWQ5EE01 88 aa16.09■□□□□ 0.17
CDR2-202ENST00000561630 PCLOQ9Y6V0 5065 aa16.09■□□□□ 0.17
CDR2-202ENST00000561630 DNAH5Q8TE73 4624 aa16.08■□□□□ 0.17
CDR2-202ENST00000561630 SNAI2O43623 268 aa16.08■□□□□ 0.16
CDR2-202ENST00000561630 OR10AG1Q8NH19 301 aa16.08■□□□□ 0.16
CDR2-202ENST00000561630 IGLV2-8P01709 118 aa16.07■□□□□ 0.16
CDR2-202ENST00000561630 OR5AL1P0C617 328 aa16.07■□□□□ 0.16
CDR2-202ENST00000561630 SMIM12Q96EX1 92 aa16.07■□□□□ 0.16
CDR2-202ENST00000561630 VAX2Q9UIW0 290 aa16.07■□□□□ 0.16
CDR2-202ENST00000561630 RAB19A4D1S5 217 aa16.06■□□□□ 0.16
CDR2-202ENST00000561630 TAGLN2P37802 199 aaKnown RBP16.06■□□□□ 0.16
CDR2-202ENST00000561630 GNG4P50150 75 aa16.06■□□□□ 0.16
CDR2-202ENST00000561630 ERVFC1-1P60608 527 aa16.06■□□□□ 0.16
CDR2-202ENST00000561630 IBA57-AS1B1ANH7 110 aa16.05■□□□□ 0.16
CDR2-202ENST00000561630 MED9Q9NWA0 146 aa16.05■□□□□ 0.16
CDR2-202ENST00000561630 HSPG2P98160 4391 aa16.05■□□□□ 0.16
CDR2-202ENST00000561630 TRBV10-1A0A0K0K1A3 114 aa16.04■□□□□ 0.16
CDR2-202ENST00000561630 TRBV20OR9-2A0A075B6H5 130 aa16.03■□□□□ 0.16
CDR2-202ENST00000561630 A0A087WWC5 75 aa16.03■□□□□ 0.16
CDR2-202ENST00000561630 EREGO14944 169 aa16.03■□□□□ 0.16
CDR2-202ENST00000561630 DAZAP1Q96EP5 407 aaKnown RBP16.03■□□□□ 0.16
CDR2-202ENST00000561630 A0A087WTM6 91 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 MUC21A0A0G2JKD1 596 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 MUC21A0A140T8X8 626 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 C19orf71A6NCJ1 209 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 CDK2AP2O75956 126 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 IGHV3-30P01768 117 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 IGHV3-33P01772 117 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 IGHV3-30-3P0DP02 117 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 IGHV3-30-5P0DP03 117 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 SPANXN1Q5VSR9 72 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 ALKAL2Q6UX46 152 aa16.02■□□□□ 0.16
CDR2-202ENST00000561630 APOBP04114 4563 aaKnown RBP16.01■□□□□ 0.15
CDR2-202ENST00000561630 RAB4BP61018 213 aa16.01■□□□□ 0.15
CDR2-202ENST00000561630 PGPEP1Q9NXJ5 209 aa16.01■□□□□ 0.15
CDR2-202ENST00000561630 RPS20P60866 119 aaKnown RBP16■□□□□ 0.15
CDR2-202ENST00000561630 BLOC1S1P78537 153 aa16■□□□□ 0.15
CDR2-202ENST00000561630 OR2D3Q8NGH3 330 aa16■□□□□ 0.15
CDR2-202ENST00000561630 IGLC6P0CF74 106 aa15.99■□□□□ 0.15
CDR2-202ENST00000561630 RPL36AP83881 106 aaKnown RBP15.99■□□□□ 0.15
CDR2-202ENST00000561630 OR10G8Q8NGN5 311 aa15.99■□□□□ 0.15
CDR2-202ENST00000561630 RPL36ALQ969Q0 106 aaKnown RBP15.99■□□□□ 0.15
CDR2-202ENST00000561630 BIN3Q9NQY0 253 aa15.99■□□□□ 0.15
CDR2-202ENST00000561630 TRBV7-3A0A075B6L6 115 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 A0A1B0GVG6 124 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 GZMBP10144 247 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 UBE2D3P61077 147 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 UBE2D2P62837 147 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 LAGE3Q14657 143 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 ZNF56Q15929 161 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 Q8N3U1 123 aa15.98■□□□□ 0.15
CDR2-202ENST00000561630 P01737 135 aa15.97■□□□□ 0.15
CDR2-202ENST00000561630 SSTP61278 116 aa15.97■□□□□ 0.15
CDR2-202ENST00000561630 FER1L6-AS1Q8NA97 138 aa15.97■□□□□ 0.15
CDR2-202ENST00000561630 LYPD6BQ8NI32 183 aa15.97■□□□□ 0.15
CDR2-202ENST00000561630 Q9HAA7 133 aa15.97■□□□□ 0.15
CDR2-202ENST00000561630 CDPF1Q6NVV7 123 aa15.96■□□□□ 0.15
CDR2-202ENST00000561630 AP1S3Q96PC3 154 aa15.96■□□□□ 0.15
CDR2-202ENST00000561630 TPPP3Q9BW30 176 aa15.96■□□□□ 0.15
CDR2-202ENST00000561630 KIF25-AS1Q9Y6Z4 181 aa15.96■□□□□ 0.15
CDR2-202ENST00000561630 XKRY2A2RUG3 117 aa15.95■□□□□ 0.14
CDR2-202ENST00000561630 RBFOX3A6NFN3 312 aa15.95■□□□□ 0.14
CDR2-202ENST00000561630 PSCAO43653 123 aa15.95■□□□□ 0.14
CDR2-202ENST00000561630 NKX2-5P52952 324 aaPredicted RBP15.95■□□□□ 0.14
CDR2-202ENST00000561630 NEXN-AS1Q8NBZ9 246 aa15.95■□□□□ 0.14
CDR2-202ENST00000561630 SMIM17P0DL12 118 aa15.94■□□□□ 0.14
CDR2-202ENST00000561630 ABCA13Q86UQ4 5058 aa15.94■□□□□ 0.14
CDR2-202ENST00000561630 F2Z2F3 143 aa15.93■□□□□ 0.14
CDR2-202ENST00000561630 F5H697 171 aa15.93■□□□□ 0.14
CDR2-202ENST00000561630 FUSP35637 526 aaKnown RBP eCLIP15.93■□□□□ 0.14
CDR2-202ENST00000561630 DAZ4Q86SG3 579 aaKnown RBP15.93■□□□□ 0.14
CDR2-202ENST00000561630 NIT1Q86X76 327 aa15.93■□□□□ 0.14
CDR2-202ENST00000561630 DAZ3Q9NR90 486 aaKnown RBP15.93■□□□□ 0.14
CDR2-202ENST00000561630 LRCOL1A6NCL2 159 aa15.92■□□□□ 0.14
CDR2-202ENST00000561630 TMEM250H0YL14 139 aa15.92■□□□□ 0.14
CDR2-202ENST00000561630 CACNG7P62955 275 aa15.92■□□□□ 0.14
CDR2-202ENST00000561630 NUDT10Q8NFP7 164 aa15.92■□□□□ 0.14
CDR2-202ENST00000561630 NUDT11Q96G61 164 aa15.92■□□□□ 0.14
CDR2-202ENST00000561630 OCC1Q8TAD7 63 aa15.91■□□□□ 0.14
CDR2-202ENST00000561630 URGCP-MRPS24S4R325 110 aa15.91■□□□□ 0.14
CDR2-202ENST00000561630 TRAV8-3A0A0A6YYJ7 113 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms