RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 NPYP01303 97 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 LTAP01374 205 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 CTSGP08311 255 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 C11orf52Q96A22 123 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 IGKV1-17P01599 117 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 C16orf54Q6UWD8 224 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
TRAF3-208ENST00000560371 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
TRAF3-208ENST00000560371 PYY3Q5JQD4 70 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
TRAF3-208ENST00000560371 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.73
TRAF3-208ENST00000560371 MYCNOSP40205 109 aa10.46□□□□□ -0.73
TRAF3-208ENST00000560371 K7EMI3 77 aa10.46□□□□□ -0.74
TRAF3-208ENST00000560371 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.74
TRAF3-208ENST00000560371 DAZ4Q86SG3 579 aaKnown RBP10.46□□□□□ -0.74
TRAF3-208ENST00000560371 DAZ3Q9NR90 486 aaKnown RBP10.46□□□□□ -0.74
TRAF3-208ENST00000560371 DEFB135Q30KP9 77 aa10.46□□□□□ -0.74
TRAF3-208ENST00000560371 IGHG2P01859 326 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 C5orf38Q86SI9 138 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 TRBV20-1A0A075B6N2 111 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 LOXL1Q08397 574 aaPredicted RBP10.45□□□□□ -0.74
TRAF3-208ENST00000560371 C4orf3Q8WVX3 66 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 KLK5Q9Y337 293 aaPredicted RBP10.45□□□□□ -0.74
TRAF3-208ENST00000560371 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
TRAF3-208ENST00000560371 INSL3P51460 131 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 TNRC6BQ9UPQ9 1833 aaKnown RBP10.44□□□□□ -0.74
TRAF3-208ENST00000560371 COL4A3Q01955 1670 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 J3QQQ9 107 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 Q8N7P7 452 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 ADAMTS20P59510 1910 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 IGLV10-54A0A075B6I4 117 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 IGLV1-47P01700 117 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 C14orf132Q9NPU4 83 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 PTPRSQ13332 1948 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 MTORP42345 2549 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 WISP2O76076 250 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 CRYGCP07315 174 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 K7EMT4 169 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 TRACP01848 142 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
TRAF3-208ENST00000560371 FGF6P10767 208 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 SPRY2O43597 315 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 ANKRD17O75179 2603 aaKnown RBP10.43□□□□□ -0.74
TRAF3-208ENST00000560371 ZNF503Q96F45 646 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 WIPF3A6NGB9 483 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 F8W735 103 aaPredicted RBP10.43□□□□□ -0.74
TRAF3-208ENST00000560371 TMEM258P61165 79 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 RBM3P98179 157 aaKnown RBP10.43□□□□□ -0.74
TRAF3-208ENST00000560371 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
TRAF3-208ENST00000560371 K7EQD1 137 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 TMEM89A2RUT3 159 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 CAMK2N2Q96S95 79 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 CPAMD8Q8IZJ3 1885 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 SPANXA1Q9NS26 97 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 PRO1854Q9UHT4 67 aa10.42□□□□□ -0.74
TRAF3-208ENST00000560371 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 SVIPQ8NHG7 77 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 COX7A2LO14548 114 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 Q6ZSR3 168 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 SIRPDQ9H106 197 aa10.41□□□□□ -0.74
TRAF3-208ENST00000560371 WFDC9Q8NEX5 89 aa10.4□□□□□ -0.74
TRAF3-208ENST00000560371 SEC61GP60059 68 aa10.4□□□□□ -0.74
TRAF3-208ENST00000560371 ZNF843Q8N446 348 aa10.4□□□□□ -0.74
TRAF3-208ENST00000560371 DEFB4AO15263 64 aa10.4□□□□□ -0.74
TRAF3-208ENST00000560371 PRO3102Q9H379 93 aa10.4□□□□□ -0.74
TRAF3-208ENST00000560371 K7EN84 100 aa10.4□□□□□ -0.75
TRAF3-208ENST00000560371 Q8N1Y9 231 aa10.4□□□□□ -0.75
TRAF3-208ENST00000560371 RPL39LQ96EH5 51 aaKnown RBP10.4□□□□□ -0.75
TRAF3-208ENST00000560371 TM2D2Q9BX73 214 aa10.4□□□□□ -0.75
TRAF3-208ENST00000560371 Q9H8V8 135 aa10.4□□□□□ -0.75
TRAF3-208ENST00000560371 TIRAPP58753 221 aa10.39□□□□□ -0.75
TRAF3-208ENST00000560371 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-208ENST00000560371 PRRC2CQ9Y520 2896 aaKnown RBP10.39□□□□□ -0.75
TRAF3-208ENST00000560371 Q6ZWC4 215 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 TMEM61Q8N0U2 210 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 LRRC75A-AS1Q8N1F1 130 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 COX8AP10176 69 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 ETDCA0A1B0GVM5 59 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 LMO4P61968 165 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 IL17DQ8TAD2 202 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 F8P00451 2351 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
TRAF3-208ENST00000560371 C19orf84I3L1E1 186 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 HERV-K104P63124 156 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 IL15RAQ13261 267 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 ZNF124Q15973 351 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 MSMPQ1L6U9 139 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 IGLL5B9A064 214 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms