RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ATP6V0E2Q8NHE4 81 aa7.88□□□□□ -1.15
RABGGTA-216ENST00000560243 SFRP2Q96HF1 295 aa7.88□□□□□ -1.15
RABGGTA-216ENST00000560243 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
RABGGTA-216ENST00000560243 C16orf90A8MZG2 172 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 TEX46H3BTG2 121 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 MED14OSP0DP75 135 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 BCL2P10415 239 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 EVI2AP22794 236 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 NKX2-5P52952 324 aaPredicted RBP7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 MEF2BQ02080 365 aaPredicted RBP7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 ZFP82Q8N141 532 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 Q8N3U1 123 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 GTSF1LQ9H1H1 148 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
RABGGTA-216ENST00000560243 HSPG2P98160 4391 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 TRAV9-2A0A087WT02 112 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 IGHV3-38A0A0C4DH36 116 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 SSTP61278 116 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 OR10J3Q5JRS4 329 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 ALKAL2Q6UX46 152 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 MSRB1Q9NZV6 116 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 BOLA1Q9Y3E2 137 aa7.86□□□□□ -1.15
RABGGTA-216ENST00000560243 TRAV8-6A0A0B4J262 113 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 RHODO00212 210 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 PDE6DO43924 150 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 CXCL1P09341 107 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 GZMBP10144 247 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 LINC01556Q5JQF7 62 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 LELP1Q5T871 98 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 MED9Q9NWA0 146 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 VAX2Q9UIW0 290 aa7.85□□□□□ -1.15
RABGGTA-216ENST00000560243 C19orf71A6NCJ1 209 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 SNAI2O43623 268 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 IFNA1P01562 189 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 IGHV3-30P01768 117 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 IGHV3-33P01772 117 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 IGHV3-30-3P0DP02 117 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 IGHV3-30-5P0DP03 117 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 GNG4P50150 75 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
RABGGTA-216ENST00000560243 RBFOX3A6NFN3 312 aa7.83□□□□□ -1.16
RABGGTA-216ENST00000560243 K7EP13 123 aa7.83□□□□□ -1.16
RABGGTA-216ENST00000560243 OR5AL1P0C617 328 aa7.83□□□□□ -1.16
RABGGTA-216ENST00000560243 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
RABGGTA-216ENST00000560243 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
RABGGTA-216ENST00000560243 A0A087WTM6 91 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 SPANXN1Q5VSR9 72 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 C10orf126Q8N4M7 172 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 TPPP3Q9BW30 176 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 Q9HAA7 133 aa7.82□□□□□ -1.16
RABGGTA-216ENST00000560243 ERVFC1-1P60608 527 aa7.81□□□□□ -1.16
RABGGTA-216ENST00000560243 ZNF56Q15929 161 aa7.81□□□□□ -1.16
RABGGTA-216ENST00000560243 DAZAP1Q96EP5 407 aaKnown RBP7.81□□□□□ -1.16
RABGGTA-216ENST00000560243 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
RABGGTA-216ENST00000560243 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
RABGGTA-216ENST00000560243 TRBV10-1A0A0K0K1A3 114 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 K7EN84 100 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 TAGLN2P37802 199 aaKnown RBP7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 RAB4BP61018 213 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 UBE2D3P61077 147 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 UBE2D2P62837 147 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 BLOC1S1P78537 153 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 DAZ4Q86SG3 579 aaKnown RBP7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 FER1L6-AS1Q8NA97 138 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 LYPD6BQ8NI32 183 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 SMIM12Q96EX1 92 aa7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 DAZ3Q9NR90 486 aaKnown RBP7.8□□□□□ -1.16
RABGGTA-216ENST00000560243 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 A0A087WWC5 75 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 P01737 135 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 RPS20P60866 119 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 RPL36AP83881 106 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 NUDT10Q8NFP7 164 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 OCC1Q8TAD7 63 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 RPL36ALQ969Q0 106 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 NUDT11Q96G61 164 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 RNASE7Q9H1E1 156 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-216ENST00000560243 LRCOL1A6NCL2 159 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 F5H697 171 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 CDK2AP2O75956 126 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 LYZL1Q6UWQ5 148 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 OR10G8Q8NGN5 311 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 DNAJC30Q96LL9 226 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 AP1S3Q96PC3 154 aa7.78□□□□□ -1.16
RABGGTA-216ENST00000560243 EREGO14944 169 aa7.77□□□□□ -1.17
RABGGTA-216ENST00000560243 PSCAO43653 123 aa7.77□□□□□ -1.17
RABGGTA-216ENST00000560243 TOR2AQ5JU69 321 aa7.77□□□□□ -1.17
RABGGTA-216ENST00000560243 NIT1Q86X76 327 aa7.77□□□□□ -1.17
RABGGTA-216ENST00000560243 PGPEP1Q9NXJ5 209 aa7.77□□□□□ -1.17
RABGGTA-216ENST00000560243 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
RABGGTA-216ENST00000560243 MGPP08493 103 aa7.76□□□□□ -1.17
RABGGTA-216ENST00000560243 SMIM17P0DL12 118 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms