RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 C14orf178Q8N769 122 aaPredicted RBP5.9□□□□□ -1.46
USP3-217ENST00000560070 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 SFRP2Q96HF1 295 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 SMIM7Q9BQ49 75 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 BIN3Q9NQY0 253 aa5.9□□□□□ -1.46
USP3-217ENST00000560070 RYR2Q92736 4967 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 F5H697 171 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 GATCO43716 136 aaKnown RBP5.89□□□□□ -1.47
USP3-217ENST00000560070 CIDEAO60543 219 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 NXPH4O95158 308 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 RAB14P61106 215 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 PEA15Q15121 130 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 LYZL1Q6UWQ5 148 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 SMIM12Q96EX1 92 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 LYSTQ99698 3801 aa5.89□□□□□ -1.47
USP3-217ENST00000560070 NBDYA0A0U1RRE5 68 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 TRBV6-4A0A1B0GX49 114 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 XKRY2A2RUG3 117 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 SNAI2O43623 268 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 MED14OSP0DP75 135 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 FAM3BP58499 235 aaPredicted RBP5.88□□□□□ -1.47
USP3-217ENST00000560070 ERVFC1-1P60608 527 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 RHOHQ15669 191 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 ZNF56Q15929 161 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 TMEM241Q24JQ0 296 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 UFSP1Q6NVU6 142 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 ZFP2Q6ZN57 461 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
USP3-217ENST00000560070 SSBP4Q9BWG4 385 aaPredicted RBP5.88□□□□□ -1.47
USP3-217ENST00000560070 RPP21Q9H633 154 aaKnown RBP5.88□□□□□ -1.47
USP3-217ENST00000560070 MRPS16Q9Y3D3 137 aaKnown RBP5.88□□□□□ -1.47
USP3-217ENST00000560070 MGPP08493 103 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 CXCL1P09341 107 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 OR5AL1P0C617 328 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 IGLC6P0CF74 106 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 PIK3CD-AS1Q5SR53 167 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 Q6ZR54 194 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 PGLYRP4Q96LB8 373 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
USP3-217ENST00000560070 RHODO00212 210 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 SIVA1O15304 175 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 NTF3P20783 257 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 IFITM2Q01629 132 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 TWIST1Q15672 202 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 ADIRFQ15847 76 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 OR10J3Q5JRS4 329 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 C1orf134Q5TEV5 83 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 LINC01551Q86U37 167 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 WFDC10BQ8IUB3 73 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 TNFRSF18Q9Y5U5 241 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 HYDINQ4G0P3 5121 aa5.86□□□□□ -1.47
USP3-217ENST00000560070 IGHV3-38A0A0C4DH36 116 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 A0A1W2PPQ1 181 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 F2Z2F3 143 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 RTL8CO15255 209 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 EVI2AP22794 236 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 FOXA3P55318 350 aaPredicted RBP5.85□□□□□ -1.47
USP3-217ENST00000560070 RPL23P62829 140 aaKnown RBP5.85□□□□□ -1.47
USP3-217ENST00000560070 CACNG7P62955 275 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 SOHLH1Q5JUK2 328 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 SH2D6Q7Z4S9 175 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 GTSF1Q8WW33 167 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 UPK3BQ9BT76 320 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 GTSF1LQ9H1H1 148 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 LY96Q9Y6Y9 160 aa5.85□□□□□ -1.47
USP3-217ENST00000560070 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 PRSS29PA6NIE9 313 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 A8MWL6 223 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 IGHV3-33P01772 117 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 IGHV3-30-3P0DP02 117 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 RAB4BP61018 213 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 RPL36AP83881 106 aaKnown RBP5.84□□□□□ -1.47
USP3-217ENST00000560070 FAM74A3Q4VXF1 159 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 FAM231DQ6ZW35 169 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 C6orf223Q8N319 242 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 DEFB104AQ8WTQ1 72 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 RPL36ALQ969Q0 106 aaKnown RBP5.84□□□□□ -1.47
USP3-217ENST00000560070 AP1S3Q96PC3 154 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
USP3-217ENST00000560070 NDUFS6O75380 124 aaKnown RBP5.83□□□□□ -1.48
USP3-217ENST00000560070 LINC00315P59091 139 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 C15orf54Q8N8G6 183 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 NEXN-AS1Q8NBZ9 246 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 OR10G8Q8NGN5 311 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 ISOC2Q96AB3 205 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 OSTCQ9NRP0 149 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 NAT8Q9UHE5 227 aa5.83□□□□□ -1.48
USP3-217ENST00000560070 TRBV7-3A0A075B6L6 115 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 TRAV9-2A0A087WT02 112 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 TRGC1P0CF51 173 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 TTC32Q5I0X7 151 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 CLLU1Q5K131 121 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 LELP1Q5T871 98 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 SUMO4Q6EEV6 95 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms