RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
RABGGTA-211ENST00000559850 LY96Q9Y6Y9 160 aa10.08□□□□□ -0.8
RABGGTA-211ENST00000559850 RBFOX3A6NFN3 312 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 CXCL1P09341 107 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 MED14OSP0DP75 135 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 BLOC1S1P78537 153 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 SH2D6Q7Z4S9 175 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 OR2D3Q8NGH3 330 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
RABGGTA-211ENST00000559850 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 RHODO00212 210 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 SNAI2O43623 268 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 LINC00694P0DN24 101 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 DNAH11Q96DT5 4516 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 PKHD1P08F94 4074 aa10.06□□□□□ -0.8
RABGGTA-211ENST00000559850 CEBPGP53567 150 aa10.05□□□□□ -0.8
RABGGTA-211ENST00000559850 TIRAPP58753 221 aa10.05□□□□□ -0.8
RABGGTA-211ENST00000559850 SPANXN1Q5VSR9 72 aa10.05□□□□□ -0.8
RABGGTA-211ENST00000559850 Q8N3U1 123 aa10.05□□□□□ -0.8
RABGGTA-211ENST00000559850 SSBP4Q9BWG4 385 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-211ENST00000559850 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
RABGGTA-211ENST00000559850 TRAV8-6A0A0B4J262 113 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 IGHV3-38A0A0C4DH36 116 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 K7EN84 100 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 EVI2AP22794 236 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 TAGLN2P37802 199 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 ZNF56Q15929 161 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 TOR2AQ5JU69 321 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 LELP1Q5T871 98 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
RABGGTA-211ENST00000559850 TRAV9-2A0A087WT02 112 aa10.03□□□□□ -0.8
RABGGTA-211ENST00000559850 P01737 135 aa10.03□□□□□ -0.8
RABGGTA-211ENST00000559850 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
RABGGTA-211ENST00000559850 OCC1Q8TAD7 63 aa10.03□□□□□ -0.8
RABGGTA-211ENST00000559850 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-211ENST00000559850 MSRB1Q9NZV6 116 aa10.03□□□□□ -0.8
RABGGTA-211ENST00000559850 KIAA1109Q2LD37 5005 aa10.02□□□□□ -0.8
RABGGTA-211ENST00000559850 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
RABGGTA-211ENST00000559850 SPATA12Q7Z6I5 190 aa10.02□□□□□ -0.81
RABGGTA-211ENST00000559850 FER1L6-AS1Q8NA97 138 aa10.02□□□□□ -0.81
RABGGTA-211ENST00000559850 NUDT10Q8NFP7 164 aa10.02□□□□□ -0.81
RABGGTA-211ENST00000559850 SMIM12Q96EX1 92 aa10.02□□□□□ -0.81
RABGGTA-211ENST00000559850 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
RABGGTA-211ENST00000559850 F5H697 171 aa10.01□□□□□ -0.81
RABGGTA-211ENST00000559850 KRTAP10-2P60368 255 aa10.01□□□□□ -0.81
RABGGTA-211ENST00000559850 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-211ENST00000559850 LINC01556Q5JQF7 62 aa10.01□□□□□ -0.81
RABGGTA-211ENST00000559850 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-211ENST00000559850 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
RABGGTA-211ENST00000559850 HERC2O95714 4834 aa10□□□□□ -0.81
RABGGTA-211ENST00000559850 C16orf90A8MZG2 172 aa10□□□□□ -0.81
RABGGTA-211ENST00000559850 RAB4BP61018 213 aa10□□□□□ -0.81
RABGGTA-211ENST00000559850 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
RABGGTA-211ENST00000559850 Q9HAA7 133 aa10□□□□□ -0.81
RABGGTA-211ENST00000559850 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 MGPP08493 103 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 BTF3P20290 206 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 UBE2D3P61077 147 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 UBE2D2P62837 147 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 AP1S3Q96PC3 154 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 BIN3Q9NQY0 253 aa9.99□□□□□ -0.81
RABGGTA-211ENST00000559850 SMIM17P0DL12 118 aa9.98□□□□□ -0.81
RABGGTA-211ENST00000559850 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-211ENST00000559850 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
RABGGTA-211ENST00000559850 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-211ENST00000559850 FAM210AQ96ND0 272 aa9.98□□□□□ -0.81
RABGGTA-211ENST00000559850 TRBV7-3A0A075B6L6 115 aa9.97□□□□□ -0.81
RABGGTA-211ENST00000559850 TRBV10-1A0A0K0K1A3 114 aa9.97□□□□□ -0.81
RABGGTA-211ENST00000559850 XKRY2A2RUG3 117 aa9.97□□□□□ -0.81
RABGGTA-211ENST00000559850 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-211ENST00000559850 C10orf126Q8N4M7 172 aa9.97□□□□□ -0.81
RABGGTA-211ENST00000559850 IBA57-AS1B1ANH7 110 aa9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 K7EP13 123 aa9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 CACNG7P62955 275 aa9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 DAZ4Q86SG3 579 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 SMIM7Q9BQ49 75 aa9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 DAZ3Q9NR90 486 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-211ENST00000559850 A0A087WTM6 91 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 A0A087WWC5 75 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 GATCO43716 136 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 NTF3P20783 257 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 CTRLP40313 264 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 TEX261Q6UWH6 196 aa9.95□□□□□ -0.82
RABGGTA-211ENST00000559850 GTSF1Q8WW33 167 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms