RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SFRP2Q96HF1 295 aa10.75□□□□□ -0.69
LINC01220-201ENST00000558575 RPP21Q9H633 154 aaKnown RBP10.75□□□□□ -0.69
LINC01220-201ENST00000558575 A0A096LPF7 62 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 A8MWV9 139 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 GATCO43716 136 aaKnown RBP10.74□□□□□ -0.69
LINC01220-201ENST00000558575 SSTP61278 116 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 SLAQ13239 276 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 ZFP82Q8N141 532 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 FER1L6-AS1Q8NA97 138 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 SYT8Q8NBV8 401 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 NAT8Q9UHE5 227 aa10.74□□□□□ -0.69
LINC01220-201ENST00000558575 ERVFC1-1P60608 527 aa10.73□□□□□ -0.69
LINC01220-201ENST00000558575 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
LINC01220-201ENST00000558575 ZFP2Q6ZN57 461 aa10.73□□□□□ -0.69
LINC01220-201ENST00000558575 OSTCQ9NRP0 149 aa10.73□□□□□ -0.69
LINC01220-201ENST00000558575 MSRB1Q9NZV6 116 aa10.73□□□□□ -0.69
LINC01220-201ENST00000558575 A0A087WWL8 130 aa10.72□□□□□ -0.69
LINC01220-201ENST00000558575 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
LINC01220-201ENST00000558575 CIDEAO60543 219 aa10.72□□□□□ -0.69
LINC01220-201ENST00000558575 SLC25A29Q8N8R3 303 aa10.72□□□□□ -0.69
LINC01220-201ENST00000558575 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
LINC01220-201ENST00000558575 Q9UF83 564 aa10.72□□□□□ -0.69
LINC01220-201ENST00000558575 XKRY2A2RUG3 117 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 P0DMU3 169 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 LINC00315P59091 139 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 ESRGQ1W209 222 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 SPANXN1Q5VSR9 72 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 V9GYV3 84 aa10.71□□□□□ -0.69
LINC01220-201ENST00000558575 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 A0A1W2PPQ1 181 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 F2Z2F3 143 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 K7EQD1 137 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 GYPEP15421 78 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 CTRLP40313 264 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 FOXA3P55318 350 aaPredicted RBP10.7□□□□□ -0.7
LINC01220-201ENST00000558575 ADIRFQ15847 76 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 CT83Q5H943 113 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 LINC00588Q9Y4M8 146 aa10.7□□□□□ -0.7
LINC01220-201ENST00000558575 LINC00862A6NCI5 91 aa10.69□□□□□ -0.7
LINC01220-201ENST00000558575 RNF212Q495C1 297 aa10.69□□□□□ -0.7
LINC01220-201ENST00000558575 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
LINC01220-201ENST00000558575 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
LINC01220-201ENST00000558575 C14orf178Q8N769 122 aaPredicted RBP10.69□□□□□ -0.7
LINC01220-201ENST00000558575 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
LINC01220-201ENST00000558575 ICOSQ9Y6W8 199 aa10.69□□□□□ -0.7
LINC01220-201ENST00000558575 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
LINC01220-201ENST00000558575 A8MWL6 223 aa10.68□□□□□ -0.7
LINC01220-201ENST00000558575 NTF3P20783 257 aa10.68□□□□□ -0.7
LINC01220-201ENST00000558575 CACNG7P62955 275 aa10.68□□□□□ -0.7
LINC01220-201ENST00000558575 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
LINC01220-201ENST00000558575 OR10G8Q8NGN5 311 aa10.68□□□□□ -0.7
LINC01220-201ENST00000558575 RHODO00212 210 aa10.67□□□□□ -0.7
LINC01220-201ENST00000558575 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
LINC01220-201ENST00000558575 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
LINC01220-201ENST00000558575 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
LINC01220-201ENST00000558575 TSKUQ8WUA8 353 aa10.67□□□□□ -0.7
LINC01220-201ENST00000558575 PGLYRP4Q96LB8 373 aa10.67□□□□□ -0.7
LINC01220-201ENST00000558575 TMEM218A2RU14 115 aa10.66□□□□□ -0.7
LINC01220-201ENST00000558575 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
LINC01220-201ENST00000558575 EVI2AP22794 236 aa10.66□□□□□ -0.7
LINC01220-201ENST00000558575 RHOHQ15669 191 aa10.66□□□□□ -0.7
LINC01220-201ENST00000558575 C15orf54Q8N8G6 183 aa10.66□□□□□ -0.7
LINC01220-201ENST00000558575 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 CCL18P55774 89 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
LINC01220-201ENST00000558575 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
LINC01220-201ENST00000558575 CDK2AP2O75956 126 aa10.64□□□□□ -0.71
LINC01220-201ENST00000558575 SRIP30626 198 aa10.64□□□□□ -0.71
LINC01220-201ENST00000558575 RAB4BP61018 213 aa10.64□□□□□ -0.71
LINC01220-201ENST00000558575 TWIST1Q15672 202 aa10.64□□□□□ -0.71
LINC01220-201ENST00000558575 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
LINC01220-201ENST00000558575 UBR4Q5T4S7 5183 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 LRP1BQ9NZR2 4599 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 GAGE12JA6NER3 117 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 M0R2N4 97 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 GAGE1Q13065 139 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 GAGE4Q13068 117 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 GAGE5Q13069 117 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 GAGE13Q4V321 117 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 NUP35Q8NFH5 326 aa10.63□□□□□ -0.71
LINC01220-201ENST00000558575 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
LINC01220-201ENST00000558575 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
LINC01220-201ENST00000558575 FAM3BP58499 235 aaPredicted RBP10.62□□□□□ -0.71
LINC01220-201ENST00000558575 Q8N1X5 172 aa10.62□□□□□ -0.71
LINC01220-201ENST00000558575 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
LINC01220-201ENST00000558575 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
LINC01220-201ENST00000558575 TRGC1P0CF51 173 aa10.61□□□□□ -0.71
LINC01220-201ENST00000558575 PNRC1Q12796 327 aaPredicted RBP10.61□□□□□ -0.71
LINC01220-201ENST00000558575 ZNF56Q15929 161 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms