RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
TSPAN3-204ENST00000558394 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
TSPAN3-204ENST00000558394 TRBV10-1A0A0K0K1A3 114 aa11.36□□□□□ -0.59
TSPAN3-204ENST00000558394 PKIAP61925 76 aa11.36□□□□□ -0.59
TSPAN3-204ENST00000558394 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.36□□□□□ -0.59
TSPAN3-204ENST00000558394 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
TSPAN3-204ENST00000558394 A0A087WWL8 130 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 FABP5P3A8MUU1 101 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 UBE2D3P61077 147 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 UBE2D2P62837 147 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 SMIM3Q9BZL3 60 aa11.35□□□□□ -0.59
TSPAN3-204ENST00000558394 B4DEV8 164 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 H0YIZ8 118 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 UPK1BO75841 260 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 ARL14EPLP0DKL9 152 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 CYCSP99999 105 aaKnown RBP11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 HSPB11Q9Y547 144 aa11.34□□□□□ -0.59
TSPAN3-204ENST00000558394 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
TSPAN3-204ENST00000558394 RAB2AP61019 212 aa11.33□□□□□ -0.6
TSPAN3-204ENST00000558394 SUMO1P63165 101 aaKnown RBP11.33□□□□□ -0.6
TSPAN3-204ENST00000558394 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
TSPAN3-204ENST00000558394 PHLDA3Q9Y5J5 127 aa11.33□□□□□ -0.6
TSPAN3-204ENST00000558394 A0A087WYN8 130 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 GAS8-AS1O95177 125 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 PTTG1O95997 202 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 AP5S1Q9NUS5 200 aa11.32□□□□□ -0.6
TSPAN3-204ENST00000558394 hDV102S1A0JD36 115 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 INMT-MINDY4F8WBC2 141 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 M0R381 172 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 PHOX2AO14813 284 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 PET100P0DJ07 73 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 CDC34P49427 236 aaPredicted RBP11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 H2BFSP57053 126 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
TSPAN3-204ENST00000558394 M0R036 132 aa11.29□□□□□ -0.6
TSPAN3-204ENST00000558394 RPL12P30050 165 aaKnown RBP11.29□□□□□ -0.6
TSPAN3-204ENST00000558394 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
TSPAN3-204ENST00000558394 ODF1Q14990 250 aa11.29□□□□□ -0.6
TSPAN3-204ENST00000558394 ARL2-SNX15V9GYD0 113 aa11.29□□□□□ -0.6
TSPAN3-204ENST00000558394 TRAV34A0A0B4J273 112 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 SSNA1O43805 119 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 MPC2O95563 127 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 CHTF8P0CG12 524 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 GCHFRP30047 84 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 IFITM3Q01628 133 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 DNLZQ5SXM8 178 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 OR10G8Q8NGN5 311 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 TMEM167BQ9NRX6 74 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
TSPAN3-204ENST00000558394 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
TSPAN3-204ENST00000558394 SPACA4Q8TDM5 124 aa11.27□□□□□ -0.61
TSPAN3-204ENST00000558394 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
TSPAN3-204ENST00000558394 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
TSPAN3-204ENST00000558394 PRR34Q9NV39 138 aa11.27□□□□□ -0.61
TSPAN3-204ENST00000558394 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
TSPAN3-204ENST00000558394 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
TSPAN3-204ENST00000558394 ZNF56Q15929 161 aa11.26□□□□□ -0.61
TSPAN3-204ENST00000558394 RAB4BP61018 213 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 RBX1P62877 108 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 REG3GQ6UW15 175 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 SUN5Q8TC36 379 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 RAB24Q969Q5 203 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
TSPAN3-204ENST00000558394 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 CXorf1O96002 111 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 IFNA7P01567 189 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 DEFA1P59665 94 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 DEFA3P59666 94 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 GAGE6Q13070 117 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 KRTAP26-1Q6PEX3 210 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
TSPAN3-204ENST00000558394 TMSB15BA0A087X1C1 80 aa11.23□□□□□ -0.61
TSPAN3-204ENST00000558394 FAM162BQ5T6X4 162 aa11.23□□□□□ -0.61
TSPAN3-204ENST00000558394 TRBV25-1A0A075B6N4 114 aa11.22□□□□□ -0.61
TSPAN3-204ENST00000558394 SH2D1AO60880 128 aa11.22□□□□□ -0.61
TSPAN3-204ENST00000558394 PRR3P79522 188 aaKnown RBP11.22□□□□□ -0.61
TSPAN3-204ENST00000558394 REG3AQ06141 175 aa11.22□□□□□ -0.61
TSPAN3-204ENST00000558394 Q86TA4 180 aa11.22□□□□□ -0.61
TSPAN3-204ENST00000558394 DERL1Q9BUN8 251 aa11.22□□□□□ -0.61
TSPAN3-204ENST00000558394 TRAV8-4A0A0B4J246 113 aa11.21□□□□□ -0.61
TSPAN3-204ENST00000558394 A0A1W2PRE2 83 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms