RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 C9orf47Q6ZRZ4 202 aa10.85□□□□□ -0.67
SPG11-210ENST00000558319 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
SPG11-210ENST00000558319 ETV2O00321 342 aaPredicted RBP10.84□□□□□ -0.67
SPG11-210ENST00000558319 ROS1P08922 2347 aa10.84□□□□□ -0.67
SPG11-210ENST00000558319 PKDREJQ9NTG1 2253 aa10.84□□□□□ -0.67
SPG11-210ENST00000558319 A0A096LNI7 61 aa10.84□□□□□ -0.67
SPG11-210ENST00000558319 CNOT1A5YKK6 2376 aaKnown RBP10.84□□□□□ -0.67
SPG11-210ENST00000558319 H0YGX0 51 aa10.84□□□□□ -0.67
SPG11-210ENST00000558319 ELANEP08246 267 aa10.84□□□□□ -0.67
SPG11-210ENST00000558319 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
SPG11-210ENST00000558319 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
SPG11-210ENST00000558319 WI2-2373I1.2A0A1W2PRP0 233 aa10.83□□□□□ -0.68
SPG11-210ENST00000558319 NDUFB1O75438 58 aa10.83□□□□□ -0.68
SPG11-210ENST00000558319 UBE2AP49459 152 aa10.83□□□□□ -0.68
SPG11-210ENST00000558319 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
SPG11-210ENST00000558319 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
SPG11-210ENST00000558319 NDUFV3P56181 108 aaKnown RBP10.82□□□□□ -0.68
SPG11-210ENST00000558319 TCL1BO95988 128 aa10.82□□□□□ -0.68
SPG11-210ENST00000558319 TRBV12-3P01733 135 aa10.82□□□□□ -0.68
SPG11-210ENST00000558319 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
SPG11-210ENST00000558319 COA6Q5JTJ3 125 aaKnown RBP10.82□□□□□ -0.68
SPG11-210ENST00000558319 AJUBAQ96IF1 538 aa10.82□□□□□ -0.68
SPG11-210ENST00000558319 Q6ZUT4 128 aa10.82□□□□□ -0.68
SPG11-210ENST00000558319 UPK3BQ9BT76 320 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 NCKAP5O14513 1909 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 H0Y9J4 135 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 COX7A2LO14548 114 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 SPATA12Q7Z6I5 190 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 Q8TCH9 128 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
SPG11-210ENST00000558319 PLXNA3P51805 1871 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 RSPO1Q2MKA7 263 aaPredicted RBP10.8□□□□□ -0.68
SPG11-210ENST00000558319 K7EQD1 137 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 CCL18P55774 89 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 IL15RAQ13261 267 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 C20orf197Q8N268 126 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 RNF138Q8WVD3 245 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 ATP5G1P05496 136 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 TP73-AS1Q9UF72 201 aa10.8□□□□□ -0.68
SPG11-210ENST00000558319 ADAMTS9Q9P2N4 1935 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 SEC61GP60059 68 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 C9orf66Q5T8R8 295 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 PLA2G5P39877 138 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 TOMM6Q96B49 74 aa10.79□□□□□ -0.68
SPG11-210ENST00000558319 THSD7BQ9C0I4 1608 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 J3QLI3 93 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 LINC00311Q8N616 119 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 HIGD1BQ9P298 99 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 E9PLD3 99 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 WISP2O76076 250 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 IGKV4-1P06312 121 aa10.78□□□□□ -0.68
SPG11-210ENST00000558319 MGAMO43451 1857 aa10.77□□□□□ -0.68
SPG11-210ENST00000558319 IGLC6P0CF74 106 aa10.77□□□□□ -0.68
SPG11-210ENST00000558319 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.68
SPG11-210ENST00000558319 ATP6V0E2Q8NHE4 81 aa10.77□□□□□ -0.68
SPG11-210ENST00000558319 NFE4Q86UQ8 179 aa10.77□□□□□ -0.69
SPG11-210ENST00000558319 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
SPG11-210ENST00000558319 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
SPG11-210ENST00000558319 LOXL1Q08397 574 aaPredicted RBP10.77□□□□□ -0.69
SPG11-210ENST00000558319 PLXNA4Q9HCM2 1894 aa10.77□□□□□ -0.69
SPG11-210ENST00000558319 KLK12Q9UKR0 248 aa10.77□□□□□ -0.69
SPG11-210ENST00000558319 JMJD7-PLA2G4BH0Y9G9 81 aa10.76□□□□□ -0.69
SPG11-210ENST00000558319 V9GYY9 64 aa10.76□□□□□ -0.69
SPG11-210ENST00000558319 ODF1Q14990 250 aa10.76□□□□□ -0.69
SPG11-210ENST00000558319 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
SPG11-210ENST00000558319 NDUFA11Q86Y39 141 aa10.76□□□□□ -0.69
SPG11-210ENST00000558319 Q8N1Y9 231 aa10.76□□□□□ -0.69
SPG11-210ENST00000558319 CEMP1Q6PRD7 247 aaPredicted RBP10.75□□□□□ -0.69
SPG11-210ENST00000558319 HHLA3Q9XRX5 114 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 C10orf105Q8TEF2 133 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 P0DMU3 169 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
SPG11-210ENST00000558319 ACACAQ13085 2346 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 SPART-AS1P0CW21 52 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 DSCAML1Q8TD84 2053 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 TMEM256-PLSCR3K7ERE1 68 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 SRCAPQ6ZRS2 3230 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 MRPL36Q9P0J6 103 aaKnown RBP10.74□□□□□ -0.69
SPG11-210ENST00000558319 ZGRF1Q86YA3 2104 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 H3BT86 120 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 LINC00643Q86TS7 51 aa10.74□□□□□ -0.69
SPG11-210ENST00000558319 DIRC1Q969H9 104 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 IGLV1-44P01699 117 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 DAZ2Q13117 558 aaKnown RBP10.73□□□□□ -0.69
SPG11-210ENST00000558319 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 IGFL3Q6UXB1 125 aa10.73□□□□□ -0.69
SPG11-210ENST00000558319 DAZ4Q86SG3 579 aaKnown RBP10.73□□□□□ -0.69
SPG11-210ENST00000558319 DAZ3Q9NR90 486 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms