RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 MYLKQ15746 1914 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 MDFICQ9P1T7 246 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 CACNA1BQ00975 2339 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 B4DSR2 109 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 RPL39P62891 51 aaKnown RBP9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 LOXL1Q08397 574 aaPredicted RBP9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 ZNF524Q96C55 264 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 TEX22C9J3V5 150 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 G3V318 75 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 IGLV3-9A0A075B6K5 115 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 COL8A2P25067 703 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 KRTAP27-1Q3LI81 207 aa9.12□□□□□ -0.95
CSPG4P12-201ENST00000558282 MRPS12O15235 138 aaKnown RBP9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 IGLV1-44P01699 117 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 C20orf203Q8NBC4 194 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 MRPL36Q9P0J6 103 aaKnown RBP9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 A0A0J9YY99 117 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 FRMPD3Q5JV73 1810 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 MLST8Q9BVC4 326 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 PI4KAP42356 2102 aa9.11□□□□□ -0.95
CSPG4P12-201ENST00000558282 WI2-2373I1.2A0A1W2PRP0 233 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 K7EIM0 57 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 NDUFS5O43920 106 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 PRB1P04280 392 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 DAND5Q8N907 189 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 ABCA4P78363 2273 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 MYO7BQ6PIF6 2116 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 TIMM17BO60830 172 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
CSPG4P12-201ENST00000558282 ANGP03950 147 aaKnown RBP9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 XCL1P47992 114 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 TANC1Q9C0D5 1861 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 IGKV1OR2-108A0A075B7D4 117 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 P0C879 139 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 BRD3OSQ6XYD6 125 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 Q9HAA7 133 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 COL6A6A6NMZ7 2263 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 CLPSL1A2RUU4 121 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 EPOPA6NHQ4 379 aa9.09□□□□□ -0.95
CSPG4P12-201ENST00000558282 TRIAP1O43715 76 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 FGF23Q9GZV9 251 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 DNAH12Q6ZR08 3092 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 FNDC1Q4ZHG4 1894 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 ZNF503-AS2A6NEH8 195 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 HRCT1Q6UXD1 115 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 ODF3L1Q8IXM7 274 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 COL4A6Q14031 1691 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 BPY2O14599 106 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 DIAPH2-AS1Q14236 149 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 C11orf53Q8IXP5 236 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 PROK2Q9HC23 129 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 U3KQK5 164 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 ETDCA0A1B0GVM5 59 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 GATA3P23771 443 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 BLCAPP62952 87 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 RMI2Q96E14 147 aa9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 MKI67P46013 3256 aaKnown RBP9.08□□□□□ -0.96
CSPG4P12-201ENST00000558282 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 UBE2BP63146 152 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 E7EQL1 145 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 ZNF407Q9C0G0 2248 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 NLRC5Q86WI3 1866 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 ELANEP08246 267 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 MAPKAPK5-AS1Q8N8E1 139 aa9.07□□□□□ -0.96
CSPG4P12-201ENST00000558282 PSCAO43653 123 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 CFHR3Q02985 330 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 NPBQ8NG41 125 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 ARFGEF3Q5TH69 2177 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 A0A0G2JNJ9 132 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 Q9UFV3 132 aa9.06□□□□□ -0.96
CSPG4P12-201ENST00000558282 CTSGP08311 255 aa9.05□□□□□ -0.96
CSPG4P12-201ENST00000558282 K7EQD1 137 aa9.05□□□□□ -0.96
CSPG4P12-201ENST00000558282 IGHV4-28A0A0C4DH34 117 aa9.05□□□□□ -0.96
CSPG4P12-201ENST00000558282 LST1O00453 97 aa9.05□□□□□ -0.96
CSPG4P12-201ENST00000558282 Q6JHZ5 121 aa9.05□□□□□ -0.96
CSPG4P12-201ENST00000558282 VWA8A3KMH1 1905 aa9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 SPRY4Q9C004 299 aa9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 INSL3P51460 131 aa9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 LINC00322Q6ZN03 302 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
CSPG4P12-201ENST00000558282 IGHV3-30P01768 117 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms