RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 DNAH5Q8TE73 4624 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
NEDD4-212ENST00000557845 FAM74A4Q5TZK3 123 aa11.26□□□□□ -0.61
NEDD4-212ENST00000557845 Q6ZNX1 250 aa11.26□□□□□ -0.61
NEDD4-212ENST00000557845 MANBALQ9NQG1 85 aa11.26□□□□□ -0.61
NEDD4-212ENST00000557845 PGPEP1Q9NXJ5 209 aa11.26□□□□□ -0.61
NEDD4-212ENST00000557845 A0A087WWL8 130 aa11.25□□□□□ -0.61
NEDD4-212ENST00000557845 IBA57-AS1B1ANH7 110 aa11.25□□□□□ -0.61
NEDD4-212ENST00000557845 TEX46H3BTG2 121 aa11.25□□□□□ -0.61
NEDD4-212ENST00000557845 C1QBP02746 253 aa11.25□□□□□ -0.61
NEDD4-212ENST00000557845 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
NEDD4-212ENST00000557845 SULT1A2P50226 295 aa11.25□□□□□ -0.61
NEDD4-212ENST00000557845 RPL19P84098 196 aaKnown RBP11.25□□□□□ -0.61
NEDD4-212ENST00000557845 ZFP82Q8N141 532 aa11.25□□□□□ -0.61
NEDD4-212ENST00000557845 A0A087WTM6 91 aa11.24□□□□□ -0.61
NEDD4-212ENST00000557845 IGHV3-30P01768 117 aa11.24□□□□□ -0.61
NEDD4-212ENST00000557845 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
NEDD4-212ENST00000557845 IGHV3-30-3P0DP02 117 aa11.24□□□□□ -0.61
NEDD4-212ENST00000557845 IGHV3-30-5P0DP03 117 aa11.24□□□□□ -0.61
NEDD4-212ENST00000557845 HSPG2P98160 4391 aa11.23□□□□□ -0.61
NEDD4-212ENST00000557845 CXCL1P09341 107 aa11.23□□□□□ -0.61
NEDD4-212ENST00000557845 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
NEDD4-212ENST00000557845 SLC51BQ86UW2 128 aa11.23□□□□□ -0.61
NEDD4-212ENST00000557845 C11orf52Q96A22 123 aa11.23□□□□□ -0.61
NEDD4-212ENST00000557845 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
NEDD4-212ENST00000557845 FUSP35637 526 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEDD4-212ENST00000557845 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
NEDD4-212ENST00000557845 APOBP04114 4563 aaKnown RBP11.21□□□□□ -0.61
NEDD4-212ENST00000557845 A0A087WWC5 75 aa11.21□□□□□ -0.61
NEDD4-212ENST00000557845 SNAI2O43623 268 aa11.21□□□□□ -0.61
NEDD4-212ENST00000557845 OR5AL1P0C617 328 aa11.2□□□□□ -0.62
NEDD4-212ENST00000557845 CDPF1Q6NVV7 123 aa11.2□□□□□ -0.62
NEDD4-212ENST00000557845 OR10AG1Q8NH19 301 aa11.2□□□□□ -0.62
NEDD4-212ENST00000557845 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
NEDD4-212ENST00000557845 TRBV10-1A0A0K0K1A3 114 aa11.19□□□□□ -0.62
NEDD4-212ENST00000557845 PSCAO43653 123 aa11.19□□□□□ -0.62
NEDD4-212ENST00000557845 IGLV2-8P01709 118 aa11.19□□□□□ -0.62
NEDD4-212ENST00000557845 RAB4BP61018 213 aa11.19□□□□□ -0.62
NEDD4-212ENST00000557845 MEF2BQ02080 365 aaPredicted RBP11.19□□□□□ -0.62
NEDD4-212ENST00000557845 CENPWQ5EE01 88 aa11.19□□□□□ -0.62
NEDD4-212ENST00000557845 Q9HAA7 133 aa11.19□□□□□ -0.62
NEDD4-212ENST00000557845 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 RAB19A4D1S5 217 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 LRCOL1A6NCL2 159 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 PDE6DO43924 150 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 IFNA1P01562 189 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 LAGE3Q14657 143 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 Q8N3U1 123 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
NEDD4-212ENST00000557845 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
NEDD4-212ENST00000557845 SSTP61278 116 aa11.17□□□□□ -0.62
NEDD4-212ENST00000557845 RPL36AP83881 106 aaKnown RBP11.17□□□□□ -0.62
NEDD4-212ENST00000557845 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
NEDD4-212ENST00000557845 RPL36ALQ969Q0 106 aaKnown RBP11.17□□□□□ -0.62
NEDD4-212ENST00000557845 DAZAP1Q96EP5 407 aaKnown RBP11.17□□□□□ -0.62
NEDD4-212ENST00000557845 MED9Q9NWA0 146 aa11.17□□□□□ -0.62
NEDD4-212ENST00000557845 ABCA13Q86UQ4 5058 aa11.17□□□□□ -0.62
NEDD4-212ENST00000557845 hCG_2014768A0A024R1R8 64 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 BCL2P10415 239 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 GNG4P50150 75 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 UBE2D3P61077 147 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 UBE2D2P62837 147 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 DAZ4Q86SG3 579 aaKnown RBP11.16□□□□□ -0.62
NEDD4-212ENST00000557845 C9orf62Q8N4C0 152 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 SMIM12Q96EX1 92 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 DAZ3Q9NR90 486 aaKnown RBP11.16□□□□□ -0.62
NEDD4-212ENST00000557845 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
NEDD4-212ENST00000557845 ZNF56Q15929 161 aa11.15□□□□□ -0.62
NEDD4-212ENST00000557845 OR10G8Q8NGN5 311 aa11.15□□□□□ -0.62
NEDD4-212ENST00000557845 TRBV20OR9-2A0A075B6H5 130 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 GZMBP10144 247 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
NEDD4-212ENST00000557845 NIT1Q86X76 327 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 Q8N1X5 172 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 TM2D2Q9BX73 214 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 KIF25-AS1Q9Y6Z4 181 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 URGCP-MRPS24S4R325 110 aa11.14□□□□□ -0.63
NEDD4-212ENST00000557845 F5H697 171 aa11.13□□□□□ -0.63
NEDD4-212ENST00000557845 IGLC6P0CF74 106 aa11.13□□□□□ -0.63
NEDD4-212ENST00000557845 TAGLN2P37802 199 aaKnown RBP11.13□□□□□ -0.63
NEDD4-212ENST00000557845 TOR2AQ5JU69 321 aa11.13□□□□□ -0.63
NEDD4-212ENST00000557845 NEXN-AS1Q8NBZ9 246 aa11.13□□□□□ -0.63
NEDD4-212ENST00000557845 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 GCSHP23434 173 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 KRTAP10-1P60331 282 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 Q8N814 137 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 BIN3Q9NQY0 253 aa11.12□□□□□ -0.63
NEDD4-212ENST00000557845 P01737 135 aa11.11□□□□□ -0.63
NEDD4-212ENST00000557845 XGP55808 180 aa11.11□□□□□ -0.63
NEDD4-212ENST00000557845 IGLV5-52A0A0A0MRZ9 124 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 TRBV6-8A0A0A6YYG3 113 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 XKRY2A2RUG3 117 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms