RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 FOXI2Q6ZQN5 318 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 PRNTQ86SH4 94 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 FAM24BQ8N5W8 94 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 ZNF738Q8NE65 137 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 OR8A1Q8NGG7 326 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 OR10J6PQ8NGY7 276 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 ZC2HC1AQ96GY0 325 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 FAM210BQ96KR6 192 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 CHCHD5Q9BSY4 110 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
FOXN3-215ENST00000557261 IGHV3OR16-13A0A075B7E8 117 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 IGHV3-49A0A0A0MS15 119 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 IGHV3-74A0A0B4J1X5 117 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 OR4C46A6NHA9 309 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 ZNF705GA8MUZ8 300 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-215ENST00000557261 KLLNB2CW77 178 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 DUSP14O95147 198 aaKnown RBP4.36□□□□□ -1.71
FOXN3-215ENST00000557261 OXTP01178 125 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 SNRPCP09234 159 aaKnown RBP4.36□□□□□ -1.71
FOXN3-215ENST00000557261 INSL3P51460 131 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 CMC4P56277 68 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-215ENST00000557261 RAB5BP61020 215 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 RNF182Q8N6D2 247 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 DYNLRB2Q8TF09 96 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 VGLL1Q99990 258 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 GNB1LQ9BYB4 327 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 AGPAT4-IT1Q9H0P7 198 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 RNASE7Q9H1E1 156 aaKnown RBP4.36□□□□□ -1.71
FOXN3-215ENST00000557261 JPT2Q9H910 190 aa4.36□□□□□ -1.71
FOXN3-215ENST00000557261 ZNF256Q9Y2P7 627 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-215ENST00000557261 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 TRAV9-2A0A087WT02 112 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 TGIF2-C20orf24A0A0A6YYL0 155 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 A0A0J9YX75 114 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 IZUMO1RA6ND01 250 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 FABP5P3A8MUU1 101 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 ZNF705FA8MVS1 300 aaPredicted RBP4.35□□□□□ -1.71
FOXN3-215ENST00000557261 C1orf196B1AJZ1 125 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 PHOX2AO14813 284 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 IGLV1-51P01701 117 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 HLA-DQA1P01909 254 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 HLA-DMBP28068 263 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 CTRLP40313 264 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 DEFB114Q30KQ6 69 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 ACTL10Q5JWF8 245 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 DNLZQ5SXM8 178 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 TMEM61Q8N0U2 210 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 URGCP-MRPS24S4R325 110 aa4.35□□□□□ -1.71
FOXN3-215ENST00000557261 MEGF8Q7Z7M0 2845 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 TRAV21A0A0B4J279 112 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 RBMY1BA6NDE4 496 aaKnown RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 RBMY1EA6NEQ0 496 aaKnown RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 IFITM10A6NMD0 228 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 HIGD1CA8MV81 97 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 SH2D1AO60880 128 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 S100A8P05109 93 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 RBMY1DP0C7P1 496 aaKnown RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 RBMY1A1P0DJD3 496 aaKnown RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 HLA-DRB4P13762 266 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 TSPOP30536 169 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 CRIP1P50238 77 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 TDRG1Q3Y452 100 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 EBLN2Q6P2I7 272 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 LINC00322Q6ZN03 302 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 NUP35Q8NFH5 326 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 Q8TAT8 98 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 CHCHD10Q8WYQ3 142 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-215ENST00000557261 C20orf144Q9BQM9 153 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 HLA-DRB4X5D2U9 266 aa4.34□□□□□ -1.71
FOXN3-215ENST00000557261 TGP01266 2768 aa4.34□□□□□ -1.72
FOXN3-215ENST00000557261 TMEM189A5PLL7 270 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 EPM2AB3EWF7 344 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 F2Z2F3 143 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 OR5AL1P0C617 328 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 ZNF688P0C7X2 276 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 IGLC6P0CF74 106 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 PMCHP20382 165 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 RPS10P46783 165 aaKnown RBP4.33□□□□□ -1.72
FOXN3-215ENST00000557261 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 HBBP68871 147 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 PSMG4Q5JS54 123 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 COA6Q5JTJ3 125 aaKnown RBP4.33□□□□□ -1.72
FOXN3-215ENST00000557261 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 GTSF1Q8WW33 167 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 TMEM158Q8WZ71 300 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 SCRT2Q9NQ03 307 aa4.33□□□□□ -1.72
FOXN3-215ENST00000557261 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 A0A1B0GUT8 65 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 SNAI2O43623 268 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 ZNF80P51504 273 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms