RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 IFNA1P01562 189 aa15.34■□□□□ 0.05
PABPN1-207ENST00000556821 CRYGDP07320 174 aa15.34■□□□□ 0.05
PABPN1-207ENST00000556821 FAM74A4Q5TZK3 123 aa15.34■□□□□ 0.05
PABPN1-207ENST00000556821 ALKAL2Q6UX46 152 aa15.34■□□□□ 0.05
PABPN1-207ENST00000556821 MAPKAPK5-AS1Q8N8E1 139 aa15.34■□□□□ 0.05
PABPN1-207ENST00000556821 APOBP04114 4563 aaKnown RBP15.33■□□□□ 0.04
PABPN1-207ENST00000556821 TRBV20OR9-2A0A075B6H5 130 aa15.33■□□□□ 0.04
PABPN1-207ENST00000556821 A0A087WWL8 130 aa15.33■□□□□ 0.04
PABPN1-207ENST00000556821 RAB19A4D1S5 217 aa15.33■□□□□ 0.04
PABPN1-207ENST00000556821 OR10AG1Q8NH19 301 aa15.33■□□□□ 0.04
PABPN1-207ENST00000556821 SNAI2O43623 268 aa15.32■□□□□ 0.04
PABPN1-207ENST00000556821 PDE6DO43924 150 aa15.32■□□□□ 0.04
PABPN1-207ENST00000556821 NKX2-5P52952 324 aaPredicted RBP15.32■□□□□ 0.04
PABPN1-207ENST00000556821 Q8N1X5 172 aa15.32■□□□□ 0.04
PABPN1-207ENST00000556821 ATP6V0E2Q8NHE4 81 aa15.32■□□□□ 0.04
PABPN1-207ENST00000556821 SSBP4Q9BWG4 385 aaPredicted RBP15.32■□□□□ 0.04
PABPN1-207ENST00000556821 VAX2Q9UIW0 290 aa15.32■□□□□ 0.04
PABPN1-207ENST00000556821 GAGE12JA6NER3 117 aa15.31■□□□□ 0.04
PABPN1-207ENST00000556821 GAGE1Q13065 139 aa15.31■□□□□ 0.04
PABPN1-207ENST00000556821 GAGE4Q13068 117 aa15.31■□□□□ 0.04
PABPN1-207ENST00000556821 GAGE5Q13069 117 aa15.31■□□□□ 0.04
PABPN1-207ENST00000556821 GAGE13Q4V321 117 aa15.31■□□□□ 0.04
PABPN1-207ENST00000556821 GTSF1LQ9H1H1 148 aa15.31■□□□□ 0.04
PABPN1-207ENST00000556821 IGHV3-38A0A0C4DH36 116 aa15.3■□□□□ 0.04
PABPN1-207ENST00000556821 K7EP13 123 aa15.3■□□□□ 0.04
PABPN1-207ENST00000556821 OR5AL1P0C617 328 aa15.3■□□□□ 0.04
PABPN1-207ENST00000556821 EVI2AP22794 236 aa15.3■□□□□ 0.04
PABPN1-207ENST00000556821 LELP1Q5T871 98 aa15.3■□□□□ 0.04
PABPN1-207ENST00000556821 MED9Q9NWA0 146 aa15.3■□□□□ 0.04
PABPN1-207ENST00000556821 DNAH5Q8TE73 4624 aa15.29■□□□□ 0.04
PABPN1-207ENST00000556821 TRAV9-2A0A087WT02 112 aa15.29■□□□□ 0.04
PABPN1-207ENST00000556821 C19orf71A6NCJ1 209 aa15.29■□□□□ 0.04
PABPN1-207ENST00000556821 GNG4P50150 75 aa15.29■□□□□ 0.04
PABPN1-207ENST00000556821 SMIM12Q96EX1 92 aa15.29■□□□□ 0.04
PABPN1-207ENST00000556821 BOLA1Q9Y3E2 137 aa15.29■□□□□ 0.04
PABPN1-207ENST00000556821 MUC21A0A0G2JKD1 596 aa15.28■□□□□ 0.04
PABPN1-207ENST00000556821 MUC21A0A140T8X8 626 aa15.28■□□□□ 0.04
PABPN1-207ENST00000556821 LINC01556Q5JQF7 62 aa15.28■□□□□ 0.04
PABPN1-207ENST00000556821 OR10J3Q5JRS4 329 aa15.28■□□□□ 0.04
PABPN1-207ENST00000556821 MSRB1Q9NZV6 116 aa15.28■□□□□ 0.04
PABPN1-207ENST00000556821 TRAV8-6A0A0B4J262 113 aa15.27■□□□□ 0.04
PABPN1-207ENST00000556821 TAGLN2P37802 199 aaKnown RBP15.27■□□□□ 0.04
PABPN1-207ENST00000556821 LYPD6BQ8NI32 183 aa15.27■□□□□ 0.04
PABPN1-207ENST00000556821 GZMBP10144 247 aa15.26■□□□□ 0.03
PABPN1-207ENST00000556821 KRTAP10-2P60368 255 aa15.26■□□□□ 0.03
PABPN1-207ENST00000556821 SPATA12Q7Z6I5 190 aa15.26■□□□□ 0.03
PABPN1-207ENST00000556821 C16orf90A8MZG2 172 aa15.25■□□□□ 0.03
PABPN1-207ENST00000556821 IGLC6P0CF74 106 aa15.25■□□□□ 0.03
PABPN1-207ENST00000556821 BLOC1S1P78537 153 aa15.25■□□□□ 0.03
PABPN1-207ENST00000556821 NFE4Q86UQ8 179 aa15.25■□□□□ 0.03
PABPN1-207ENST00000556821 C10orf126Q8N4M7 172 aa15.25■□□□□ 0.03
PABPN1-207ENST00000556821 Q8N3U1 123 aa15.24■□□□□ 0.03
PABPN1-207ENST00000556821 OR2D3Q8NGH3 330 aa15.24■□□□□ 0.03
PABPN1-207ENST00000556821 SPANXN1Q5VSR9 72 aa15.23■□□□□ 0.03
PABPN1-207ENST00000556821 TRBV10-1A0A0K0K1A3 114 aa15.22■□□□□ 0.03
PABPN1-207ENST00000556821 IGHV3-30P01768 117 aa15.22■□□□□ 0.03
PABPN1-207ENST00000556821 IGHV3-33P01772 117 aa15.22■□□□□ 0.03
PABPN1-207ENST00000556821 IGHV3-30-3P0DP02 117 aa15.22■□□□□ 0.03
PABPN1-207ENST00000556821 IGHV3-30-5P0DP03 117 aa15.22■□□□□ 0.03
PABPN1-207ENST00000556821 DAZAP1Q96EP5 407 aaKnown RBP15.22■□□□□ 0.03
PABPN1-207ENST00000556821 KIF25-AS1Q9Y6Z4 181 aa15.22■□□□□ 0.03
PABPN1-207ENST00000556821 RBFOX3A6NFN3 312 aa15.21■□□□□ 0.03
PABPN1-207ENST00000556821 IBA57-AS1B1ANH7 110 aa15.21■□□□□ 0.03
PABPN1-207ENST00000556821 RPS20P60866 119 aaKnown RBP15.21■□□□□ 0.03
PABPN1-207ENST00000556821 RAB4BP61018 213 aa15.21■□□□□ 0.03
PABPN1-207ENST00000556821 SSTP61278 116 aa15.21■□□□□ 0.03
PABPN1-207ENST00000556821 ZNF56Q15929 161 aa15.21■□□□□ 0.03
PABPN1-207ENST00000556821 FER1L6-AS1Q8NA97 138 aa15.21■□□□□ 0.03
PABPN1-207ENST00000556821 P01737 135 aa15.2■□□□□ 0.02
PABPN1-207ENST00000556821 OR10G8Q8NGN5 311 aa15.2■□□□□ 0.02
PABPN1-207ENST00000556821 TMEM250H0YL14 139 aa15.19■□□□□ 0.02
PABPN1-207ENST00000556821 K7EN84 100 aa15.19■□□□□ 0.02
PABPN1-207ENST00000556821 ERVFC1-1P60608 527 aa15.19■□□□□ 0.02
PABPN1-207ENST00000556821 UBE2D3P61077 147 aa15.19■□□□□ 0.02
PABPN1-207ENST00000556821 UBE2D2P62837 147 aa15.19■□□□□ 0.02
PABPN1-207ENST00000556821 OCC1Q8TAD7 63 aa15.19■□□□□ 0.02
PABPN1-207ENST00000556821 TRBV7-3A0A075B6L6 115 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 A0A087WTM6 91 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 A0A087WWC5 75 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 RPL36AP83881 106 aaKnown RBP15.18■□□□□ 0.02
PABPN1-207ENST00000556821 NEXN-AS1Q8NBZ9 246 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 NUDT10Q8NFP7 164 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 RPL36ALQ969Q0 106 aaKnown RBP15.18■□□□□ 0.02
PABPN1-207ENST00000556821 NUDT11Q96G61 164 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 AP1S3Q96PC3 154 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 TPPP3Q9BW30 176 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 BIN3Q9NQY0 253 aa15.18■□□□□ 0.02
PABPN1-207ENST00000556821 TOR2AQ5JU69 321 aa15.16■□□□□ 0.02
PABPN1-207ENST00000556821 Q9HAA7 133 aa15.16■□□□□ 0.02
PABPN1-207ENST00000556821 FUSP35637 526 aaKnown RBP eCLIP15.15■□□□□ 0.02
PABPN1-207ENST00000556821 LAGE3Q14657 143 aa15.15■□□□□ 0.02
PABPN1-207ENST00000556821 RNASE7Q9H1E1 156 aaKnown RBP15.15■□□□□ 0.02
PABPN1-207ENST00000556821 XKRY2A2RUG3 117 aa15.14■□□□□ 0.01
PABPN1-207ENST00000556821 F5H697 171 aa15.14■□□□□ 0.01
PABPN1-207ENST00000556821 CTRLP40313 264 aa15.14■□□□□ 0.01
PABPN1-207ENST00000556821 CACNG7P62955 275 aa15.14■□□□□ 0.01
PABPN1-207ENST00000556821 LYZL1Q6UWQ5 148 aa15.14■□□□□ 0.01
PABPN1-207ENST00000556821 DAZ4Q86SG3 579 aaKnown RBP15.14■□□□□ 0.01
PABPN1-207ENST00000556821 DAZ3Q9NR90 486 aaKnown RBP15.14■□□□□ 0.01
PABPN1-207ENST00000556821 NIT1Q86X76 327 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms