RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TRBV20OR9-2A0A075B6H5 130 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 IGKV1-9A0A0C4DH69 117 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 MYMXA0A1B0GTQ4 84 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 A0A1B0GUT8 65 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 HIGD1CA8MV81 97 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 H3BVH4 76 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 K7EQS6 105 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 M0R2P5 195 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 NDUFC2O95298 119 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 FSTL3O95633 263 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 IGKCP01834 107 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 TRGV3P03979 118 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 LINC00694P0DN24 101 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 RPL7P18124 248 aaKnown RBP2.42□□□□□ -2.02
PRPF39-210ENST00000556718 PLNP26678 52 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 TMEM258P61165 79 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 PCBD1P61457 104 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 GNG5P63218 68 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 UBE2L3P68036 154 aaKnown RBP2.42□□□□□ -2.02
PRPF39-210ENST00000556718 TFF3Q07654 80 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 TEX36Q5VZQ5 186 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 VN1R4Q7Z5H5 301 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 C15orf53Q8NAA6 179 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 MYOZ3Q8TDC0 251 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 SLC37A2Q8TED4 501 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 LINC00526Q96FQ7 95 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 PLXNB2O15031 1838 aa2.42□□□□□ -2.02
PRPF39-210ENST00000556718 DOCK4Q8N1I0 1966 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 THSD7AQ9UPZ6 1657 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 SVILO95425 2214 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 HEATR5AQ86XA9 2040 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 TRBV25-1A0A075B6N4 114 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 A6NED7 52 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 H3BQ85 93 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 ATOX1O00244 68 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 NCR2O95944 276 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 IGKV1-5P01602 117 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 COX6CP09669 75 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 IGLC6P0CF74 106 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 HLA-DMBP28068 263 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 FOXA3P55318 350 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-210ENST00000556718 FGF12P61328 243 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 HERVK_113P63121 156 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 ATXN8Q156A1 80 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 TMEM170BQ5T4T1 132 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 SBSPONQ8IVN8 264 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 Q8IYB0 196 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 ANKRD29Q8N6D5 301 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 ZC2HC1AQ96GY0 325 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 COX14Q96I36 57 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 RTL8AQ9BWD3 113 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 NXT2Q9NPJ8 142 aaKnown RBP2.41□□□□□ -2.02
PRPF39-210ENST00000556718 LAMTOR3Q9UHA4 124 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 PRNDQ9UKY0 176 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 EPDR1Q9UM22 224 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 TP53TG1Q9Y2A0 90 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 CHCHD2Q9Y6H1 151 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-210ENST00000556718 COL5A3P25940 1745 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-210ENST00000556718 TNRC6AQ8NDV7 1962 aaKnown RBP2.41□□□□□ -2.02
PRPF39-210ENST00000556718 NUP210LQ5VU65 1888 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 DOCK6Q96HP0 2047 aa2.41□□□□□ -2.02
PRPF39-210ENST00000556718 GREB1Q4ZG55 1949 aa2.4□□□□□ -2.02
PRPF39-210ENST00000556718 MGAMO43451 1857 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV8-1A0A0A6YYK1 113 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV4A0A0B4J268 109 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 A0A0B4J2C4 111 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 LINC01549A6NIU2 74 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 A8MWP4 228 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 H0YGG7 62 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 M0R135 149 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 SLC25A20O43772 301 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 LTAP01374 205 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 IGLV3-1P01715 115 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 IGHV3-53P01767 116 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 STATHP02808 62 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 CRYGDP07320 174 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 INSL3P51460 131 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 FXYD2P54710 66 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 DAD1P61803 113 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 DIAPH2-AS1Q14236 149 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 ZNF56Q15929 161 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 PIGYQ3MUY2 71 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 IGF2BP2-AS1Q96M15 143 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 LINC00527Q9UJ94 153 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 PLXNB3Q9ULL4 1909 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 THADAQ6YHU6 1953 aa2.4□□□□□ -2.03
PRPF39-210ENST00000556718 BPTFQ12830 3046 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 PTPRDP23468 1912 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 HELZP42694 1942 aaKnown RBP2.39□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV1OR2-108A0A075B7D4 117 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 IGHV3OR15-7A0A075B7D8 119 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV13-1A0A0B4J241 112 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TRBV6-1A0A0K0K1D8 114 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TRBV7-7A0A0K0K1E9 115 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TINCRA0A1B0GVN0 87 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 H3BMM0 161 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 K7ERJ3 54 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms