RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 P01737 135 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 CRYGDP07320 174 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 GZMBP10144 247 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 TIRAPP58753 221 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
ACTN1-217ENST00000556203 GAGE1Q13065 139 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 GAGE4Q13068 117 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 GAGE5Q13069 117 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 WFDC10BQ8IUB3 73 aa10.38□□□□□ -0.75
ACTN1-217ENST00000556203 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-217ENST00000556203 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
ACTN1-217ENST00000556203 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
ACTN1-217ENST00000556203 SSTP61278 116 aa10.37□□□□□ -0.75
ACTN1-217ENST00000556203 ATP6V0E2Q8NHE4 81 aa10.37□□□□□ -0.75
ACTN1-217ENST00000556203 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
ACTN1-217ENST00000556203 EIF5A2Q9GZV4 153 aaKnown RBP10.37□□□□□ -0.75
ACTN1-217ENST00000556203 CEBPGP53567 150 aa10.36□□□□□ -0.75
ACTN1-217ENST00000556203 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
ACTN1-217ENST00000556203 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
ACTN1-217ENST00000556203 FAM210AQ96ND0 272 aa10.36□□□□□ -0.75
ACTN1-217ENST00000556203 Q9UF83 564 aa10.36□□□□□ -0.75
ACTN1-217ENST00000556203 LY96Q9Y6Y9 160 aa10.36□□□□□ -0.75
ACTN1-217ENST00000556203 XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 K7EN84 100 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 NUDT10Q8NFP7 164 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 NUDT11Q96G61 164 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 GTSF1LQ9H1H1 148 aa10.35□□□□□ -0.75
ACTN1-217ENST00000556203 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
ACTN1-217ENST00000556203 LINC00315P59091 139 aa10.34□□□□□ -0.75
ACTN1-217ENST00000556203 TNP2Q05952 138 aa10.34□□□□□ -0.75
ACTN1-217ENST00000556203 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
ACTN1-217ENST00000556203 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 TRAV9-2A0A087WT02 112 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 DNAH10OSP0CZ25 163 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 ZNF56Q15929 161 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 OR10J3Q5JRS4 329 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 LELP1Q5T871 98 aa10.33□□□□□ -0.76
ACTN1-217ENST00000556203 RPP21Q9H633 154 aaKnown RBP10.33□□□□□ -0.76
ACTN1-217ENST00000556203 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
ACTN1-217ENST00000556203 NDUFS6O75380 124 aaKnown RBP10.32□□□□□ -0.76
ACTN1-217ENST00000556203 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
ACTN1-217ENST00000556203 EVI2AP22794 236 aa10.32□□□□□ -0.76
ACTN1-217ENST00000556203 RAB4BP61018 213 aa10.32□□□□□ -0.76
ACTN1-217ENST00000556203 CACNG7P62955 275 aa10.32□□□□□ -0.76
ACTN1-217ENST00000556203 AP1S3Q96PC3 154 aa10.32□□□□□ -0.76
ACTN1-217ENST00000556203 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
ACTN1-217ENST00000556203 F2Z2F3 143 aa10.31□□□□□ -0.76
ACTN1-217ENST00000556203 SMIM17P0DL12 118 aa10.31□□□□□ -0.76
ACTN1-217ENST00000556203 LYZL1Q6UWQ5 148 aa10.31□□□□□ -0.76
ACTN1-217ENST00000556203 MSRB1Q9NZV6 116 aa10.31□□□□□ -0.76
ACTN1-217ENST00000556203 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 F5H697 171 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 K7EP13 123 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
ACTN1-217ENST00000556203 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
ACTN1-217ENST00000556203 SMIM7Q9BQ49 75 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 TNFRSF18Q9Y5U5 241 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 HECTD4Q9Y4D8 3996 aa10.3□□□□□ -0.76
ACTN1-217ENST00000556203 Q6ZRN7 208 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-217ENST00000556203 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
ACTN1-217ENST00000556203 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 GATCO43716 136 aaKnown RBP10.28□□□□□ -0.76
ACTN1-217ENST00000556203 IGHV3-30P01768 117 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 IGHV3-33P01772 117 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 MGPP08493 103 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 IGHV3-30-3P0DP02 117 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 IGHV3-30-5P0DP03 117 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 CTRLP40313 264 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 ERVFC1-1P60608 527 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 UBE2D3P61077 147 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 UBE2D2P62837 147 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 LINC01551Q86U37 167 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 NEXN-AS1Q8NBZ9 246 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 OR10G8Q8NGN5 311 aa10.28□□□□□ -0.76
ACTN1-217ENST00000556203 A0A087WWC5 75 aa10.27□□□□□ -0.77
ACTN1-217ENST00000556203 C9JQL5 133 aa10.27□□□□□ -0.77
ACTN1-217ENST00000556203 NTF3P20783 257 aa10.27□□□□□ -0.77
ACTN1-217ENST00000556203 NFE4Q86UQ8 179 aa10.27□□□□□ -0.77
ACTN1-217ENST00000556203 TRGC1P0CF51 173 aa10.26□□□□□ -0.77
ACTN1-217ENST00000556203 SRSF3P84103 164 aaKnown RBP10.26□□□□□ -0.77
ACTN1-217ENST00000556203 PEA15Q15121 130 aa10.26□□□□□ -0.77
ACTN1-217ENST00000556203 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
ACTN1-217ENST00000556203 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
ACTN1-217ENST00000556203 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
ACTN1-217ENST00000556203 TWIST1Q15672 202 aa10.25□□□□□ -0.77
ACTN1-217ENST00000556203 Q8N3U1 123 aa10.25□□□□□ -0.77
ACTN1-217ENST00000556203 A8MWL6 223 aa10.24□□□□□ -0.77
ACTN1-217ENST00000556203 FAM74A3Q4VXF1 159 aa10.24□□□□□ -0.77
ACTN1-217ENST00000556203 CT83Q5H943 113 aa10.24□□□□□ -0.77
ACTN1-217ENST00000556203 SUMO4Q6EEV6 95 aa10.24□□□□□ -0.77
ACTN1-217ENST00000556203 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms