RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
SIX1-205ENST00000555955 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
SIX1-205ENST00000555955 TPRP12270 2363 aaKnown RBP11.02□□□□□ -0.65
SIX1-205ENST00000555955 LST1O00453 97 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 NDUFB3O43676 98 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 NSUN5P1Q3KNT7 163 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 ZNF876PQ49A33 203 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 C2orf48Q96LS8 159 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 CSMD1Q96PZ7 3565 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 IGHV3-35A0A0C4DH35 117 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 LEPROTO15243 131 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 TRACP01848 142 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 Q6ZSV7 163 aa11.02□□□□□ -0.65
SIX1-205ENST00000555955 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
SIX1-205ENST00000555955 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
SIX1-205ENST00000555955 F8W735 103 aaPredicted RBP11.01□□□□□ -0.65
SIX1-205ENST00000555955 LPAL2Q16609 132 aa11.01□□□□□ -0.65
SIX1-205ENST00000555955 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
SIX1-205ENST00000555955 CACNA1GO43497 2377 aa11□□□□□ -0.65
SIX1-205ENST00000555955 ASPMQ8IZT6 3477 aa11□□□□□ -0.65
SIX1-205ENST00000555955 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 MBD3L4A6NDZ8 208 aaPredicted RBP10.99□□□□□ -0.65
SIX1-205ENST00000555955 MBD3L3A6NE82 208 aaPredicted RBP10.99□□□□□ -0.65
SIX1-205ENST00000555955 MBD3L5A6NJ08 208 aaPredicted RBP10.99□□□□□ -0.65
SIX1-205ENST00000555955 RS1O15537 224 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
SIX1-205ENST00000555955 GPHB5Q86YW7 130 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 LOXP28300 417 aaPredicted RBP10.99□□□□□ -0.65
SIX1-205ENST00000555955 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
SIX1-205ENST00000555955 CEP250Q9BV73 2442 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 TTC28Q96AY4 2481 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 I3L3M4 83 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 PPP1R17O96001 155 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 C5orf38Q86SI9 138 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 TIMM17AQ99595 171 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 DMXL2Q8TDJ6 3036 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 TACC2O95359 2948 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 ADARB2-AS1A8MUL3 147 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
SIX1-205ENST00000555955 RHOHQ15669 191 aa10.97□□□□□ -0.65
SIX1-205ENST00000555955 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
SIX1-205ENST00000555955 CXCL5P42830 114 aa10.97□□□□□ -0.65
SIX1-205ENST00000555955 NPC2P61916 151 aa10.97□□□□□ -0.65
SIX1-205ENST00000555955 IGLV11-55A0A075B6I3 123 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 SDHAF1A6NFY7 115 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 BUB1B-PAK6H3BSN5 160 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 ATOX1O00244 68 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 CTSGP08311 255 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 Q5XG85 94 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 CCL17Q92583 94 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 ZNF580Q9UK33 172 aa10.96□□□□□ -0.65
SIX1-205ENST00000555955 IGLV1-47P01700 117 aa10.96□□□□□ -0.66
SIX1-205ENST00000555955 TMEM258P61165 79 aa10.96□□□□□ -0.66
SIX1-205ENST00000555955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.96□□□□□ -0.66
SIX1-205ENST00000555955 DCANP1Q8TF63 244 aa10.96□□□□□ -0.66
SIX1-205ENST00000555955 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
SIX1-205ENST00000555955 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
SIX1-205ENST00000555955 PRR9Q5T870 116 aa10.95□□□□□ -0.66
SIX1-205ENST00000555955 RP1L1Q8IWN7 2480 aaPredicted RBP10.95□□□□□ -0.66
SIX1-205ENST00000555955 IGHV3OR16-13A0A075B7E8 117 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 IGHV3-74A0A0B4J1X5 117 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 A0A0J9YX75 114 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 MRAPQ8TCY5 172 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 COX7A1P24310 79 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 LITAFQ99732 161 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 TIMM21Q9BVV7 248 aa10.94□□□□□ -0.66
SIX1-205ENST00000555955 IGF1P05019 195 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 ADAMTSL4-AS1Q5T5F5 129 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 PIMREGQ9BSJ6 248 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 VCYO14598 125 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 BUB3O43684 328 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 POLR2KP53803 58 aaKnown RBP10.93□□□□□ -0.66
SIX1-205ENST00000555955 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
SIX1-205ENST00000555955 PKDREJQ9NTG1 2253 aa10.92□□□□□ -0.66
SIX1-205ENST00000555955 TRBV7-1A0A0A6YYK4 115 aa10.92□□□□□ -0.66
SIX1-205ENST00000555955 TMEM178BH3BS89 294 aa10.92□□□□□ -0.66
SIX1-205ENST00000555955 RNF5Q99942 180 aa10.92□□□□□ -0.66
SIX1-205ENST00000555955 PRRC2AP48634 2157 aaKnown RBP10.92□□□□□ -0.66
SIX1-205ENST00000555955 POLEQ07864 2286 aa10.92□□□□□ -0.66
SIX1-205ENST00000555955 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
SIX1-205ENST00000555955 HIST1H4AP62805 103 aaKnown RBP10.92□□□□□ -0.66
SIX1-205ENST00000555955 KLRB1Q12918 225 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 C10orf105Q8TEF2 133 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 JPT2Q9H910 190 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 PEMTQ9UBM1 199 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 NACAE9PAV3 2078 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 J3QLI3 93 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 NBR2O15453 112 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
SIX1-205ENST00000555955 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
SIX1-205ENST00000555955 IGHV3-30-3P0DP02 117 aa10.9□□□□□ -0.66
SIX1-205ENST00000555955 UCNP55089 124 aa10.9□□□□□ -0.66
SIX1-205ENST00000555955 TMEM61Q8N0U2 210 aa10.9□□□□□ -0.66
SIX1-205ENST00000555955 PYGO1Q9Y3Y4 419 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms