RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 MSRB1Q9NZV6 116 aa6.26□□□□□ -1.41
VIPAS39-207ENST00000555854 Q9UF83 564 aa6.26□□□□□ -1.41
VIPAS39-207ENST00000555854 FAT3Q8TDW7 4589 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 MAP1LC3B2A6NCE7 125 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 FHITP49789 147 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 ERVFC1-1P60608 527 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 RHEBQ15382 184 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 MAP1LC3BQ9GZQ8 125 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 PARLQ9H300 379 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 JPT2Q9H910 190 aa6.25□□□□□ -1.41
VIPAS39-207ENST00000555854 TRBV6-4A0A1B0GX49 114 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 LRCOL1A6NCL2 159 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 B4DEV8 164 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 K7EQM0 130 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 SCO1O75880 301 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 CRYGDP07320 174 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 RHOHQ15669 191 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 COX8CQ7Z4L0 72 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 C15orf54Q8N8G6 183 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 NHLRC2Q8NBF2 726 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 MBD3L1Q8WWY6 194 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 SAMD10Q9BYL1 202 aa6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 EIF5A2Q9GZV4 153 aaKnown RBP6.24□□□□□ -1.41
VIPAS39-207ENST00000555854 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 H3BVH4 76 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 SH2D1AO60880 128 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 IFNA1P01562 189 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 MT-ND4LP03901 98 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 EVI2AP22794 236 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 PPT1P50897 306 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 XGP55808 180 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 SAPCD1Q5SSQ6 148 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 NFE4Q86UQ8 179 aa6.23□□□□□ -1.41
VIPAS39-207ENST00000555854 A0A087WWC5 75 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 K7EP13 123 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 MGST1P10620 155 aaKnown RBP6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 ASIPP42127 132 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 PNRC1Q12796 327 aaPredicted RBP6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 WFDC2Q14508 124 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 DNLZQ5SXM8 178 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 LELP1Q5T871 98 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 SH2D6Q7Z4S9 175 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 HIST1H2BAQ96A08 127 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 SCRT2Q9NQ03 307 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 IL36BQ9NZH7 164 aa6.22□□□□□ -1.41
VIPAS39-207ENST00000555854 TRBV6-1A0A0K0K1D8 114 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GRIFINA4D1Z8 144 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GAGE12JA6NER3 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 FABP5P3A8MUU1 101 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 M0R036 132 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 CIDEAO60543 219 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 LTAP01374 205 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GAGE1Q13065 139 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GAGE4Q13068 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GAGE5Q13069 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 ZNF674Q2M3X9 581 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GAGE13Q4V321 117 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 FAM74A3Q4VXF1 159 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 PIK3CD-AS1Q5SR53 167 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 ATRAIDQ6UW56 229 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 ZFP2Q6ZN57 461 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 C10orf126Q8N4M7 172 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 FAM213BQ8TBF2 198 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 GTSF1LQ9H1H1 148 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 BIN3Q9NQY0 253 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 TMEM242Q9NWH2 141 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 HMCN2Q8NDA2 5059 aa6.21□□□□□ -1.42
VIPAS39-207ENST00000555854 TRAV9-2A0A087WT02 112 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 A8MWV9 139 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 PAGE4O60829 102 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 ARMS2P0C7Q2 107 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 ADCYAP1P18509 176 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 S100A4P26447 101 aaKnown RBP6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 RAB5BP61020 215 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 HAMPP81172 84 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 ATP6V0E2Q8NHE4 81 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 FMC1Q96HJ9 113 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 Q9HAA7 133 aa6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
VIPAS39-207ENST00000555854 TMSB15BA0A087X1C1 80 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 A0A1B0GV50 99 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 C7orf77A4D0Y5 90 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 C1orf196B1AJZ1 125 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 RPL19P84098 196 aaKnown RBP6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms