RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 HIST1H2BHQ93079 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 PTH2Q96A98 100 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 RNF183Q96D59 192 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BNQ99877 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BMQ99879 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 X6R8D5 127 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 A0A087WWL8 130 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 SMKR1H3BMG3 65 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 CKS2P33552 79 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 EMP1P54849 157 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 FAM74A4Q5TZK3 123 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 IL17DQ8TAD2 202 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-220ENST00000555585 DNAH3Q8TD57 4116 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 A8MWV9 139 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 D6R8Y8 96 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 F5H697 171 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 K7EIL1 84 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 NCR2O95944 276 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 ORMDL3Q8N138 153 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 PRELID3AQ96N28 172 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 PKD1L1Q8TDX9 2849 aa6.94□□□□□ -1.3
HNRNPC-220ENST00000555585 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 IGHV4-28A0A0C4DH34 117 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 GAGE12BA1L429 117 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 PLAC8L1A1L4L8 177 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 RS1O15537 224 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 GAGE7O76087 117 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 PPBPP02775 128 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 GAGE12FP0CL80 117 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 GAGE12GP0CL81 117 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 GAGE12IP0CL82 117 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 MIFP14174 115 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 ZNF56Q15929 161 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 PIK3CD-AS1Q5SR53 167 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 Q6ZTI0 123 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 RASL10AQ92737 203 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 RETNQ9HD89 108 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 U3KQK5 164 aa6.93□□□□□ -1.3
HNRNPC-220ENST00000555585 TRAV26-2A0A0B4J265 109 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 DEFB4AO15263 64 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 CRYGDP07320 174 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 GATA1P15976 413 aaPredicted RBP6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 CFAP126Q5VTH2 177 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 OR4C5Q8NGB2 326 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 C18orf32Q8TCD1 76 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 NDUFAF3Q9BU61 184 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 TP53TG1Q9Y2A0 90 aa6.92□□□□□ -1.3
HNRNPC-220ENST00000555585 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 RHODO00212 210 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 GAS8-AS1O95177 125 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 NPYP01303 97 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 IGHV3-53P01767 116 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 LINC00315P59091 139 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 Q0VG73 95 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 POM121L12Q8N7R1 296 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 MRAPQ8TCY5 172 aa6.91□□□□□ -1.3
HNRNPC-220ENST00000555585 TRAV4A0A0B4J268 109 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 Q8NAQ8 132 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 MAP1LC3AQ9H492 121 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 LAMTOR2Q9Y2Q5 125 aa6.9□□□□□ -1.3
HNRNPC-220ENST00000555585 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 PPP1R17O96001 155 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 ZFP2Q6ZN57 461 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 NIT1Q86X76 327 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 NRACQ8N912 160 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 ZNF479Q96JC4 524 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 SPATA25Q9BR10 227 aa6.89□□□□□ -1.31
HNRNPC-220ENST00000555585 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 H7C1H1 209 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 SERF1AO75920 110 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 HOXA5P20719 270 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 COA6Q5JTJ3 125 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 UFSP1Q6NVU6 142 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 ST20Q9HBF5 79 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms