RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
SNX6-203ENST00000555416 SYT8Q8NBV8 401 aa9.28□□□□□ -0.92
SNX6-203ENST00000555416 MED9Q9NWA0 146 aa9.28□□□□□ -0.92
SNX6-203ENST00000555416 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.92
SNX6-203ENST00000555416 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 SNAI2O43623 268 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 IFNA1P01562 189 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 CXCL1P09341 107 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 MED14OSP0DP75 135 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 TIRAPP58753 221 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
SNX6-203ENST00000555416 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
SNX6-203ENST00000555416 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 GNG4P50150 75 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 SSTP61278 116 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 SH2D6Q7Z4S9 175 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 ZFP82Q8N141 532 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 LY96Q9Y6Y9 160 aa9.26□□□□□ -0.93
SNX6-203ENST00000555416 DYNC1H1Q14204 4646 aaKnown RBP9.25□□□□□ -0.93
SNX6-203ENST00000555416 HERC2O95714 4834 aa9.25□□□□□ -0.93
SNX6-203ENST00000555416 RBFOX3A6NFN3 312 aa9.25□□□□□ -0.93
SNX6-203ENST00000555416 J3QL48 77 aa9.25□□□□□ -0.93
SNX6-203ENST00000555416 Q8N3U1 123 aa9.25□□□□□ -0.93
SNX6-203ENST00000555416 K7EN84 100 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 RHODO00212 210 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 OR5AL1P0C617 328 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 IGLC6P0CF74 106 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
SNX6-203ENST00000555416 BLOC1S1P78537 153 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 OR2D3Q8NGH3 330 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 GTSF1LQ9H1H1 148 aa9.24□□□□□ -0.93
SNX6-203ENST00000555416 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
SNX6-203ENST00000555416 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
SNX6-203ENST00000555416 LELP1Q5T871 98 aa9.23□□□□□ -0.93
SNX6-203ENST00000555416 OCC1Q8TAD7 63 aa9.23□□□□□ -0.93
SNX6-203ENST00000555416 SMIM12Q96EX1 92 aa9.23□□□□□ -0.93
SNX6-203ENST00000555416 MSRB1Q9NZV6 116 aa9.23□□□□□ -0.93
SNX6-203ENST00000555416 KRTAP10-2P60368 255 aa9.22□□□□□ -0.93
SNX6-203ENST00000555416 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
SNX6-203ENST00000555416 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
SNX6-203ENST00000555416 IGHV3-30P01768 117 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 IGHV3-33P01772 117 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 IGHV3-30-5P0DP03 117 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 BTF3P20290 206 aaKnown RBP9.21□□□□□ -0.94
SNX6-203ENST00000555416 EVI2AP22794 236 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 FUSP35637 526 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNX6-203ENST00000555416 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 TOR2AQ5JU69 321 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 FER1L6-AS1Q8NA97 138 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 NUDT10Q8NFP7 164 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 DAZAP1Q96EP5 407 aaKnown RBP9.21□□□□□ -0.94
SNX6-203ENST00000555416 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 TPPP3Q9BW30 176 aa9.21□□□□□ -0.94
SNX6-203ENST00000555416 RNASE7Q9H1E1 156 aaKnown RBP9.21□□□□□ -0.94
SNX6-203ENST00000555416 TRAV8-6A0A0B4J262 113 aa9.2□□□□□ -0.94
SNX6-203ENST00000555416 P01737 135 aa9.2□□□□□ -0.94
SNX6-203ENST00000555416 SPATA12Q7Z6I5 190 aa9.2□□□□□ -0.94
SNX6-203ENST00000555416 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 TMEM250H0YL14 139 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 RPS20P60866 119 aaKnown RBP9.19□□□□□ -0.94
SNX6-203ENST00000555416 RAB4BP61018 213 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 UBE2D3P61077 147 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 UBE2D2P62837 147 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 ZNF56Q15929 161 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
SNX6-203ENST00000555416 CEBPGP53567 150 aa9.18□□□□□ -0.94
SNX6-203ENST00000555416 FAM210AQ96ND0 272 aa9.18□□□□□ -0.94
SNX6-203ENST00000555416 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
SNX6-203ENST00000555416 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
SNX6-203ENST00000555416 C16orf90A8MZG2 172 aa9.17□□□□□ -0.94
SNX6-203ENST00000555416 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
SNX6-203ENST00000555416 K7EP13 123 aa9.17□□□□□ -0.94
SNX6-203ENST00000555416 KRTAP17-1Q9BYP8 105 aa9.17□□□□□ -0.94
SNX6-203ENST00000555416 EIF5A2Q9GZV4 153 aaKnown RBP9.17□□□□□ -0.94
SNX6-203ENST00000555416 RPP21Q9H633 154 aaKnown RBP9.17□□□□□ -0.94
SNX6-203ENST00000555416 C9JQL5 133 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 F5H697 171 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 SRP19P09132 144 aaKnown RBP9.16□□□□□ -0.94
SNX6-203ENST00000555416 CTRLP40313 264 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 RPL36AP83881 106 aaKnown RBP9.16□□□□□ -0.94
SNX6-203ENST00000555416 DAZ4Q86SG3 579 aaKnown RBP9.16□□□□□ -0.94
SNX6-203ENST00000555416 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 OR10G8Q8NGN5 311 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 RPL36ALQ969Q0 106 aaKnown RBP9.16□□□□□ -0.94
SNX6-203ENST00000555416 AP1S3Q96PC3 154 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 Q9HAA7 133 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 BIN3Q9NQY0 253 aa9.16□□□□□ -0.94
SNX6-203ENST00000555416 DAZ3Q9NR90 486 aaKnown RBP9.16□□□□□ -0.94
SNX6-203ENST00000555416 A0A087WTM6 91 aa9.15□□□□□ -0.94
SNX6-203ENST00000555416 MGPP08493 103 aa9.15□□□□□ -0.94
SNX6-203ENST00000555416 NTF3P20783 257 aa9.15□□□□□ -0.94
SNX6-203ENST00000555416 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
SNX6-203ENST00000555416 TEX261Q6UWH6 196 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms