RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.29
GPN3-210ENST00000552180 C14orf178Q8N769 122 aaPredicted RBP13.21□□□□□ -0.29
GPN3-210ENST00000552180 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
GPN3-210ENST00000552180 A0A087WWL8 130 aa13.2□□□□□ -0.3
GPN3-210ENST00000552180 RBFOX3A6NFN3 312 aa13.2□□□□□ -0.3
GPN3-210ENST00000552180 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
GPN3-210ENST00000552180 TNP2Q05952 138 aa13.2□□□□□ -0.3
GPN3-210ENST00000552180 KIAA1109Q2LD37 5005 aa13.19□□□□□ -0.3
GPN3-210ENST00000552180 DNAH10OSP0CZ25 163 aa13.18□□□□□ -0.3
GPN3-210ENST00000552180 FAM74A4Q5TZK3 123 aa13.18□□□□□ -0.3
GPN3-210ENST00000552180 ATP6V0E2Q8NHE4 81 aa13.18□□□□□ -0.3
GPN3-210ENST00000552180 DAZAP1Q96EP5 407 aaKnown RBP13.18□□□□□ -0.3
GPN3-210ENST00000552180 HERC2O95714 4834 aa13.18□□□□□ -0.3
GPN3-210ENST00000552180 MUC21A0A0G2JKD1 596 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 MUC21A0A140T8X8 626 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 IGLC6P0CF74 106 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 GZMBP10144 247 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 LINC00315P59091 139 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 OR2D3Q8NGH3 330 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 OCC1Q8TAD7 63 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 LY96Q9Y6Y9 160 aa13.17□□□□□ -0.3
GPN3-210ENST00000552180 GAGE12JA6NER3 117 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 K7EN84 100 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 GAGE1Q13065 139 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 GAGE4Q13068 117 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 GAGE5Q13069 117 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 GAGE13Q4V321 117 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 Q6ZRN7 208 aaPredicted RBP13.16□□□□□ -0.3
GPN3-210ENST00000552180 BIN3Q9NQY0 253 aa13.16□□□□□ -0.3
GPN3-210ENST00000552180 K7EP13 123 aa13.15□□□□□ -0.3
GPN3-210ENST00000552180 P01737 135 aa13.15□□□□□ -0.3
GPN3-210ENST00000552180 RPS20P60866 119 aaKnown RBP13.15□□□□□ -0.3
GPN3-210ENST00000552180 LELP1Q5T871 98 aa13.15□□□□□ -0.3
GPN3-210ENST00000552180 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
GPN3-210ENST00000552180 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
GPN3-210ENST00000552180 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
GPN3-210ENST00000552180 NDUFS6O75380 124 aaKnown RBP13.14□□□□□ -0.31
GPN3-210ENST00000552180 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
GPN3-210ENST00000552180 FAM210AQ96ND0 272 aa13.14□□□□□ -0.31
GPN3-210ENST00000552180 TNFRSF18Q9Y5U5 241 aa13.14□□□□□ -0.31
GPN3-210ENST00000552180 DNAH5Q8TE73 4624 aa13.13□□□□□ -0.31
GPN3-210ENST00000552180 TRAV9-2A0A087WT02 112 aa13.13□□□□□ -0.31
GPN3-210ENST00000552180 IGHV3-38A0A0C4DH36 116 aa13.13□□□□□ -0.31
GPN3-210ENST00000552180 TOR2AQ5JU69 321 aa13.13□□□□□ -0.31
GPN3-210ENST00000552180 FER1L6-AS1Q8NA97 138 aa13.13□□□□□ -0.31
GPN3-210ENST00000552180 LRP1BQ9NZR2 4599 aa13.13□□□□□ -0.31
GPN3-210ENST00000552180 TRAV8-6A0A0B4J262 113 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 EVI2AP22794 236 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 RAB4BP61018 213 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 SSTP61278 116 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 LINC01556Q5JQF7 62 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
GPN3-210ENST00000552180 OR10J3Q5JRS4 329 aa13.11□□□□□ -0.31
GPN3-210ENST00000552180 EIF5A2Q9GZV4 153 aaKnown RBP13.11□□□□□ -0.31
GPN3-210ENST00000552180 RNASE7Q9H1E1 156 aaKnown RBP13.11□□□□□ -0.31
GPN3-210ENST00000552180 MSRB1Q9NZV6 116 aa13.11□□□□□ -0.31
GPN3-210ENST00000552180 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
GPN3-210ENST00000552180 OR10G8Q8NGN5 311 aa13.1□□□□□ -0.31
GPN3-210ENST00000552180 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
GPN3-210ENST00000552180 F2Z2F3 143 aa13.09□□□□□ -0.31
GPN3-210ENST00000552180 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
GPN3-210ENST00000552180 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
GPN3-210ENST00000552180 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
GPN3-210ENST00000552180 RYR1P21817 5038 aa13.08□□□□□ -0.31
GPN3-210ENST00000552180 UBE2D3P61077 147 aa13.08□□□□□ -0.32
GPN3-210ENST00000552180 UBE2D2P62837 147 aa13.08□□□□□ -0.32
GPN3-210ENST00000552180 CACNG7P62955 275 aa13.08□□□□□ -0.32
GPN3-210ENST00000552180 C10orf126Q8N4M7 172 aa13.08□□□□□ -0.32
GPN3-210ENST00000552180 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
GPN3-210ENST00000552180 AP1S3Q96PC3 154 aa13.08□□□□□ -0.32
GPN3-210ENST00000552180 TRBV7-3A0A075B6L6 115 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 A0A087WWC5 75 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 CTRLP40313 264 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 CEBPGP53567 150 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 RPL36AP83881 106 aaKnown RBP13.07□□□□□ -0.32
GPN3-210ENST00000552180 ZNF56Q15929 161 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 WDR73Q6P4I2 378 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 NFE4Q86UQ8 179 aa13.07□□□□□ -0.32
GPN3-210ENST00000552180 RPL36ALQ969Q0 106 aaKnown RBP13.07□□□□□ -0.32
GPN3-210ENST00000552180 IBA57-AS1B1ANH7 110 aa13.06□□□□□ -0.32
GPN3-210ENST00000552180 FAM231DQ6ZW35 169 aa13.06□□□□□ -0.32
GPN3-210ENST00000552180 CNFNQ9BYD5 112 aa13.06□□□□□ -0.32
GPN3-210ENST00000552180 F5H697 171 aa13.05□□□□□ -0.32
GPN3-210ENST00000552180 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
GPN3-210ENST00000552180 NTF3P20783 257 aa13.05□□□□□ -0.32
GPN3-210ENST00000552180 Q8N3U1 123 aa13.05□□□□□ -0.32
GPN3-210ENST00000552180 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
GPN3-210ENST00000552180 SMIM7Q9BQ49 75 aa13.05□□□□□ -0.32
GPN3-210ENST00000552180 C9JQL5 133 aa13.04□□□□□ -0.32
GPN3-210ENST00000552180 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
GPN3-210ENST00000552180 IGHV3-33P01772 117 aa13.04□□□□□ -0.32
GPN3-210ENST00000552180 IGHV3-30-3P0DP02 117 aa13.04□□□□□ -0.32
GPN3-210ENST00000552180 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
GPN3-210ENST00000552180 LINC01551Q86U37 167 aa13.04□□□□□ -0.32
GPN3-210ENST00000552180 ZNF727A8MUV8 499 aa13.03□□□□□ -0.32
GPN3-210ENST00000552180 M0QY20 66 aa13.02□□□□□ -0.33
GPN3-210ENST00000552180 GATCO43716 136 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms