RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
CDK4-210ENST00000551888 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
CDK4-210ENST00000551888 FAM231DQ6ZW35 169 aa12.1□□□□□ -0.47
CDK4-210ENST00000551888 RHODO00212 210 aa12.09□□□□□ -0.47
CDK4-210ENST00000551888 SRIP30626 198 aa12.09□□□□□ -0.47
CDK4-210ENST00000551888 FAM3BP58499 235 aaPredicted RBP12.09□□□□□ -0.47
CDK4-210ENST00000551888 RHOHQ15669 191 aa12.09□□□□□ -0.47
CDK4-210ENST00000551888 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
CDK4-210ENST00000551888 C14orf178Q8N769 122 aaPredicted RBP12.09□□□□□ -0.47
CDK4-210ENST00000551888 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
CDK4-210ENST00000551888 MSRB1Q9NZV6 116 aa12.09□□□□□ -0.47
CDK4-210ENST00000551888 MRPS16Q9Y3D3 137 aaKnown RBP12.09□□□□□ -0.47
CDK4-210ENST00000551888 M0R2N4 97 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 CTRLP40313 264 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 RAB14P61106 215 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 NEGR1Q7Z3B1 354 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 GTSF1Q8WW33 167 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 UPK3BQ9BT76 320 aa12.08□□□□□ -0.48
CDK4-210ENST00000551888 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 GATCO43716 136 aaKnown RBP12.07□□□□□ -0.48
CDK4-210ENST00000551888 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 RPL23P62829 140 aaKnown RBP12.07□□□□□ -0.48
CDK4-210ENST00000551888 FAM74A3Q4VXF1 159 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 Q6ZR54 194 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 PRADC1Q9BSG0 188 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
CDK4-210ENST00000551888 TMEM241Q24JQ0 296 aa12.06□□□□□ -0.48
CDK4-210ENST00000551888 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
CDK4-210ENST00000551888 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
CDK4-210ENST00000551888 EPPK1P58107 5090 aaKnown RBP12.05□□□□□ -0.48
CDK4-210ENST00000551888 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
CDK4-210ENST00000551888 LINC00315P59091 139 aa12.05□□□□□ -0.48
CDK4-210ENST00000551888 CNFNQ9BYD5 112 aa12.05□□□□□ -0.48
CDK4-210ENST00000551888 NAT8Q9UHE5 227 aa12.05□□□□□ -0.48
CDK4-210ENST00000551888 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 F2Z2F3 143 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 CACNG7P62955 275 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 GAGE1Q13065 139 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 GAGE4Q13068 117 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 GAGE5Q13069 117 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 ADIRFQ15847 76 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 CT83Q5H943 113 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 SOHLH1Q5JUK2 328 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 KRTAP1-5Q9BYS1 174 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 Q9H8V8 135 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
CDK4-210ENST00000551888 ZNF56Q15929 161 aa12.03□□□□□ -0.48
CDK4-210ENST00000551888 V9GYV3 84 aa12.03□□□□□ -0.48
CDK4-210ENST00000551888 DNAH17Q9UFH2 4485 aa12.03□□□□□ -0.48
CDK4-210ENST00000551888 NBDYA0A0U1RRE5 68 aa12.02□□□□□ -0.49
CDK4-210ENST00000551888 NTF3P20783 257 aa12.02□□□□□ -0.49
CDK4-210ENST00000551888 A8MWL6 223 aa12.01□□□□□ -0.49
CDK4-210ENST00000551888 EVI2AP22794 236 aa12.01□□□□□ -0.49
CDK4-210ENST00000551888 RAB4BP61018 213 aa12.01□□□□□ -0.49
CDK4-210ENST00000551888 WDR73Q6P4I2 378 aa12□□□□□ -0.49
CDK4-210ENST00000551888 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
CDK4-210ENST00000551888 WFDC10BQ8IUB3 73 aa12□□□□□ -0.49
CDK4-210ENST00000551888 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
CDK4-210ENST00000551888 TSKUQ8WUA8 353 aa12□□□□□ -0.49
CDK4-210ENST00000551888 PGLYRP4Q96LB8 373 aa12□□□□□ -0.49
CDK4-210ENST00000551888 FAT2Q9NYQ8 4349 aa12□□□□□ -0.49
CDK4-210ENST00000551888 FOXA3P55318 350 aaPredicted RBP11.99□□□□□ -0.49
CDK4-210ENST00000551888 TIRAPP58753 221 aa11.99□□□□□ -0.49
CDK4-210ENST00000551888 C15orf54Q8N8G6 183 aa11.99□□□□□ -0.49
CDK4-210ENST00000551888 TRBV10-1A0A0K0K1A3 114 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 RTL8CO15255 209 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 SIVA1O15304 175 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 MGPP08493 103 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 SMIM17P0DL12 118 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 TWIST1Q15672 202 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 OR10G8Q8NGN5 311 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
CDK4-210ENST00000551888 HIGD1CA8MV81 97 aa11.97□□□□□ -0.49
CDK4-210ENST00000551888 F5H697 171 aa11.97□□□□□ -0.49
CDK4-210ENST00000551888 TRGC1P0CF51 173 aa11.97□□□□□ -0.49
CDK4-210ENST00000551888 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
CDK4-210ENST00000551888 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
CDK4-210ENST00000551888 UBE2D3P61077 147 aa11.96□□□□□ -0.49
CDK4-210ENST00000551888 UBE2D2P62837 147 aa11.96□□□□□ -0.49
CDK4-210ENST00000551888 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
CDK4-210ENST00000551888 TRBV7-3A0A075B6L6 115 aa11.95□□□□□ -0.5
CDK4-210ENST00000551888 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
CDK4-210ENST00000551888 M0QY20 66 aa11.95□□□□□ -0.5
CDK4-210ENST00000551888 ADCYAP1P18509 176 aa11.95□□□□□ -0.5
CDK4-210ENST00000551888 RPL36AP83881 106 aaKnown RBP11.94□□□□□ -0.5
CDK4-210ENST00000551888 LELP1Q5T871 98 aa11.94□□□□□ -0.5
CDK4-210ENST00000551888 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
CDK4-210ENST00000551888 RPL36ALQ969Q0 106 aaKnown RBP11.94□□□□□ -0.5
CDK4-210ENST00000551888 DNAH10OSP0CZ25 163 aa11.93□□□□□ -0.5
CDK4-210ENST00000551888 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
CDK4-210ENST00000551888 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
CDK4-210ENST00000551888 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
CDK4-210ENST00000551888 IGHV3-38A0A0C4DH36 116 aa11.92□□□□□ -0.5
CDK4-210ENST00000551888 A0A1B0GUT8 65 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms