RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 PSMG3Q9BT73 122 aaPredicted RBP7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 LRP2P98164 4655 aa7.47□□□□□ -1.21
SMARCD1-208ENST00000550280 RNF213Q63HN8 5207 aa7.46□□□□□ -1.21
SMARCD1-208ENST00000550280 FABP5P3A8MUU1 101 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 B4DEV8 164 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 K7EQM0 130 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 UBE2D3P61077 147 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 UBE2D2P62837 147 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 SAPCD1Q5SSQ6 148 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 FAM74A4Q5TZK3 123 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 RMI2Q96E14 147 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 SFRP2Q96HF1 295 aa7.46□□□□□ -1.22
SMARCD1-208ENST00000550280 A0A1W2PRE2 83 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 M0R036 132 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 RHODO00212 210 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 SH2D1AO60880 128 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 CXorf1O96002 111 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 RPL37AP61513 92 aaKnown RBP7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 Q5BKY6 102 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 COX8CQ7Z4L0 72 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 CHCHD7Q9BUK0 85 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 TMEM167BQ9NRX6 74 aa7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
SMARCD1-208ENST00000550280 PEX7O00628 323 aa7.44□□□□□ -1.22
SMARCD1-208ENST00000550280 PRSS1P07477 247 aa7.44□□□□□ -1.22
SMARCD1-208ENST00000550280 MPV17L2Q567V2 206 aa7.44□□□□□ -1.22
SMARCD1-208ENST00000550280 AQP10Q96PS8 301 aa7.44□□□□□ -1.22
SMARCD1-208ENST00000550280 URGCP-MRPS24S4R325 110 aa7.44□□□□□ -1.22
SMARCD1-208ENST00000550280 A0A087WX48 190 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 USP17L23D6RBM5 183 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 UBE2G2P60604 165 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 SERF2P84101 59 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 OR11H4Q8NGC9 324 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 OR10G8Q8NGN5 311 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 TNFSF18Q9UNG2 199 aa7.43□□□□□ -1.22
SMARCD1-208ENST00000550280 TMSB15BA0A087X1C1 80 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 TRBV6-8A0A0A6YYG3 113 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 TRBV10-1A0A0K0K1A3 114 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 FAM74A7A6NL05 159 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 M0R381 172 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 LINC01559Q495D7 138 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 C15orf54Q8N8G6 183 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 ACTR3CQ9C0K3 210 aaPredicted RBP7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 ALG5Q9Y673 324 aa7.42□□□□□ -1.22
SMARCD1-208ENST00000550280 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 MBP02144 154 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 SEC11BP0C7V7 166 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 Q0VG73 95 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 ELOBQ15370 118 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 ZNF674Q2M3X9 581 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 RPL7L1Q6DKI1 246 aaKnown RBP7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 PRR27Q6MZM9 219 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 C1orf43Q9BWL3 253 aa7.41□□□□□ -1.22
SMARCD1-208ENST00000550280 IFNA7P01567 189 aa7.4□□□□□ -1.22
SMARCD1-208ENST00000550280 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
SMARCD1-208ENST00000550280 SDIM1Q6ZPB5 146 aa7.4□□□□□ -1.22
SMARCD1-208ENST00000550280 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
SMARCD1-208ENST00000550280 PRR34Q9NV39 138 aa7.4□□□□□ -1.22
SMARCD1-208ENST00000550280 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
SMARCD1-208ENST00000550280 CTXND1A0A1B0GTU2 59 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 TMEM262E9PQX1 116 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 LTAP01374 205 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 TPT1P13693 172 aaKnown RBP7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 RPL19P84098 196 aaKnown RBP7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 C14orf177Q52M58 125 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 FAM162BQ5T6X4 162 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 OR10AG1Q8NH19 301 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 HIST1H2BAQ96A08 127 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 ZFP30Q9Y2G7 519 aa7.39□□□□□ -1.23
SMARCD1-208ENST00000550280 TRBV6-1A0A0K0K1D8 114 aa7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 A6NHS1 94 aa7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 PTTG1O95997 202 aa7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 ANGP03950 147 aaKnown RBP7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 ZFP82Q8N141 532 aa7.38□□□□□ -1.23
SMARCD1-208ENST00000550280 MUC21A0A0G2JKD1 596 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 MUC21A0A140T8X8 626 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 CRPP02741 224 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 SLPIP03973 132 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 RAB4BP61018 213 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 RBX1P62877 108 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 DGAT2L7PQ6IED9 249 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 FMC1Q96HJ9 113 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 KIF25-AS1Q9Y6Z4 181 aa7.37□□□□□ -1.23
SMARCD1-208ENST00000550280 G3V3Q6 166 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 SNAI2O43623 268 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 DEFA1P59665 94 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 DEFA3P59666 94 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 ODF1Q14990 250 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 MIAQ16674 131 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 CHCHD5Q9BSY4 110 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 VAX2Q9UIW0 290 aa7.36□□□□□ -1.23
SMARCD1-208ENST00000550280 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 UBE2G1P62253 170 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms